Pairwise Alignments

Query, 282 a.a., Alkanesulfonates transport system permease protein from Variovorax sp. SCN45

Subject, 265 a.a., aliphatic sulfonate ABC transporter - permease subunit / transport of isethionate from Pseudomonas putida KT2440

 Score =  168 bits (425), Expect = 1e-46
 Identities = 88/253 (34%), Positives = 135/253 (53%)

Query: 26  RRIAARATDAALPWLLPVALVALWFAGADRGWISAQVLPPPQFVWDTLRDLATSGDLWLH 85
           R  ++  T    PW LPV L+A+W      GW+S ++LP P  V     +L  SG++W H
Sbjct: 3   RATSSNLTQRLAPWALPVLLLAIWQLAVSAGWLSTRILPAPSAVVSAGVELVRSGEIWTH 62

Query: 86  VSTSFTRVGVGFIAGTLLGLALGSAMGLSHRFEAYVLPTFNALVQIPVLAWLPFVLLIVG 145
           ++ S  R G+GF+ G  +GL LG   GLS+  E  +  +   +  +P LA +P V+L  G
Sbjct: 63  LAISGWRAGLGFVIGGSIGLVLGFITGLSNWGERLLDSSVQMIRNVPHLALIPLVILWFG 122

Query: 146 IGEPLKYILIAKAALVPVALNTLQGFRQTPVALREVGQVYGYSRRQQVMEIVLPHAVPTL 205
           I E  K  L+A   L P+ LNT  G R    AL E+ + YG S      +++LP A+P++
Sbjct: 123 IDESAKIFLVALGTLFPIYLNTYHGIRNVDPALVEMARSYGLSGFGLFRQVILPGALPSI 182

Query: 206 FTGVRLGFTKAWLSLVVVELVASSEGLGYLIVYGRQLFQLDLVMAAVIVVGAIGYAIDRL 265
             GVR      WL+L+V E ++++ G+GYL +  R+  Q D+V+ A+++   +G   D  
Sbjct: 183 LVGVRFALGFMWLTLIVAETISANAGIGYLAMNAREFLQTDVVVLAIVLYAVLGKIADLA 242

Query: 266 LDRLETAANRRRP 278
              LE    R  P
Sbjct: 243 ARGLERVWLRWHP 255