Pairwise Alignments

Query, 280 a.a., ABC transporter, permease protein 2 (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

Subject, 303 a.a., peptide transporter from Pseudomonas simiae WCS417

 Score =  195 bits (495), Expect = 1e-54
 Identities = 111/268 (41%), Positives = 158/268 (58%), Gaps = 7/268 (2%)

Query: 11  GAATGLLLLALFLAAALLGPALAPFDPLATDVLNRLQPP----GAAHWF--GTDALGRDL 64
           GA  GLL + L +  A+  P +AP +P        L PP    G    F  GTD LGRDL
Sbjct: 32  GAVAGLLFMLLIVFCAIFAPWVAPHNPSEQYRDFLLTPPAWLEGGQMQFLLGTDELGRDL 91

Query: 65  LSRVLVATRLDLGMAAGAVVLSLLLGSALGAWCGFVGGRIDRWIGRLVDVLMAFPLFVVA 124
           LSR++  +RL L +   +VV+SL+ G  LG + GF    +   I RL+D+++A P  ++A
Sbjct: 92  LSRLIQGSRLSLLIGLSSVVMSLIPGILLGLFAGFFPRLLGPTIMRLMDIMLALPSLLLA 151

Query: 125 MALVAAWGNSVANIVYATALINLPFYIRLARSEVGVRRNAGYVLAARLGGATAPRLLFGV 184
           +A+VA  G  + N V A A+++LP Y+RL R+ V    N  YV AARL GA  PRL+F  
Sbjct: 152 VAIVAILGPGLINTVIAIAIVSLPSYVRLTRAAVMGELNRDYVTAARLAGAGLPRLMFIT 211

Query: 185 LLPHVLPMLAVQGSINLGWALLNGAGLSFIGLGVRPPTAEWGVLVSEGAPYIITGQWWLA 244
           +LP+ +  L VQ +++   A+L+ A L F+GLGV+PPT EWG +++    Y I   WW+ 
Sbjct: 212 VLPNCMAPLIVQATLSFSSAILDAAALGFLGLGVQPPTPEWGTMLASARDY-IERAWWVV 270

Query: 245 FFPGLALFAAVGCFTLLGDALRDLLDPR 272
             PGL +  +V    L+GD LRD LDP+
Sbjct: 271 SLPGLTILLSVLAINLMGDGLRDALDPK 298