Pairwise Alignments

Query, 280 a.a., ABC transporter, permease protein 2 (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

Subject, 284 a.a., peptide ABC transporter permease from Pseudomonas simiae WCS417

 Score =  186 bits (472), Expect = 5e-52
 Identities = 106/274 (38%), Positives = 155/274 (56%), Gaps = 3/274 (1%)

Query: 1   MTARRPRIGA--GAATGLLLLALFLAAALLGPALAPFDPLATDVLNRLQPPGAAHWFGTD 58
           + A+R R+ A   A  G  LL + +A AL+G   +PFDPL  D+++R Q P AAHW GTD
Sbjct: 9   VAAKRRRVWAPANALIGGGLLVVLIALALMGLVWSPFDPLKIDLMSRFQAPSAAHWLGTD 68

Query: 59  ALGRDLLSRVLVATRLDLGMAAGAVVLSLLLGSALGAWCGFVGGRIDRWIGRLVDVLMAF 118
             GRD+ SR+L+  R  L ++   V +++L G+ +G   G++ G  DR +    D L+AF
Sbjct: 69  EFGRDVFSRLLIGARTSLWVSLLTVSVAVLAGTLIGMLAGYLRGWTDRVLMMFNDALLAF 128

Query: 119 PLFVVAMALVAAWGNSVANIVYATALINLPFYIRLARSEVGVRRNAGYVLAARLGGATAP 178
           P  ++A+ ++A  G S   IV A  +   P  +R+ R  V   R   Y+ A+R+ G +  
Sbjct: 129 PGILMALGIMAIIGASKYGIVLALGIAYTPSVVRVVRGTVLSLRELEYIEASRVIGNSEL 188

Query: 179 RLLFGVLLPHVLPMLAVQGSINLGWALLNGAGLSFIGLGVRPPTAEWGVLVSEGAPYIIT 238
             +   + P+ L  L V  +   GWALL+ + LSF+GLGV PP A WG +++   PYI +
Sbjct: 189 YTMLRHIAPNCLAPLCVLATSMFGWALLSESALSFLGLGVPPPAATWGNMLASSRPYIAS 248

Query: 239 GQWWLAFFPGLALFAAVGCFTLLGDALRDLLDPR 272
              WL  FPGL +   +    L GDALRD LDPR
Sbjct: 249 AP-WLGVFPGLFICLTLLAINLFGDALRDRLDPR 281