Pairwise Alignments

Query, 280 a.a., ABC transporter, permease protein 2 (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

Subject, 281 a.a., nickel ABC transporter permease subunit from Pseudomonas putida KT2440

 Score =  214 bits (544), Expect = 2e-60
 Identities = 123/268 (45%), Positives = 162/268 (60%), Gaps = 5/268 (1%)

Query: 4   RRPRIGAGAATGLLLLALFLAAALLGPALAPFDPLATDVLNRLQPPGAAHWFGTDALGRD 63
           RRP +      GL L+ L    AL G  +AP DP   D+  RLQ P A HW GTD LGRD
Sbjct: 14  RRPSL----MIGLALVGLLAVLALFGHWIAPHDPDLVDLGQRLQAPDARHWLGTDHLGRD 69

Query: 64  LLSRVLVATRLDLGMAAGAVVLSLLLGSALGAWCGFVGGRIDRWIGRLVDVLMAFPLFVV 123
           LLSR++V TRL LG     + L L LG A+G   GFVGGR D  + RL D+ M FP  V+
Sbjct: 70  LLSRLIVGTRLSLGSVMLTLALVLALGLAVGGVAGFVGGRTDLLLMRLCDMFMTFPTLVL 129

Query: 124 AMALVAAWGNSVANIVYATALINLPFYIRLARSEVGVRRNAGYVLAARLGGATAPRLLFG 183
           A   V   G  ++N++ A AL +  +Y R+ R  V  +R   YVLA+RL GA+    L  
Sbjct: 130 AFFFVTLLGTGLSNVIIAIALSHWAWYARMVRGLVIAQRGREYVLASRLAGASRWARLRQ 189

Query: 184 VLLPHVLPMLAVQGSINLGWALLNGAGLSFIGLGVRPPTAEWGVLVSEGAPYIITGQWWL 243
            +LP++   L V  ++++G  +L+ +GLSF+GLGV PPTAEWGV++++   +I T Q  L
Sbjct: 190 HVLPNIAGPLLVLATMDIGHMMLHVSGLSFLGLGVAPPTAEWGVMINDAKEFIWT-QPQL 248

Query: 244 AFFPGLALFAAVGCFTLLGDALRDLLDP 271
              PGL +F +V  F LLGDALRD LDP
Sbjct: 249 LLLPGLMIFFSVMAFNLLGDALRDRLDP 276