Pairwise Alignments

Query, 280 a.a., ABC transporter, permease protein 2 (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

Subject, 308 a.a., dipeptide ABC transporter - putative membrane subunit from Pseudomonas putida KT2440

 Score =  194 bits (494), Expect = 2e-54
 Identities = 113/268 (42%), Positives = 155/268 (57%), Gaps = 7/268 (2%)

Query: 11  GAATGLLLLALFLAAALLGPALAPFDPLATDVLNRLQPP----GAAHWF--GTDALGRDL 64
           GA  GL  + L +  AL  P +AP DP        L PP    G    F  GTD LGRDL
Sbjct: 37  GAVMGLAFMCLVVFCALFAPWVAPHDPSEQYRDFLLTPPVWLEGGTWQFILGTDELGRDL 96

Query: 65  LSRVLVATRLDLGMAAGAVVLSLLLGSALGAWCGFVGGRIDRWIGRLVDVLMAFPLFVVA 124
           LSR++   RL L +   +VV+SL+ G  LG   GF    +   I RL+DV++A P  ++A
Sbjct: 97  LSRLIQGARLSLLIGLSSVVMSLIPGILLGLLAGFFPQLLGPSIMRLMDVMLALPSLLLA 156

Query: 125 MALVAAWGNSVANIVYATALINLPFYIRLARSEVGVRRNAGYVLAARLGGATAPRLLFGV 184
           +A+VA  G  + N V A A+++LP Y+RL R+ V    N  YV AARL GA  PRL+F  
Sbjct: 157 VAIVAILGPGLINTVIAIAIVSLPSYVRLTRAAVMGELNRDYVTAARLAGAGLPRLMFVT 216

Query: 185 LLPHVLPMLAVQGSINLGWALLNGAGLSFIGLGVRPPTAEWGVLVSEGAPYIITGQWWLA 244
           +LP+ +  L VQ +++   A+L+ A L F+GLGV+PPT EWG +++    Y I   WW+ 
Sbjct: 217 VLPNCMAPLIVQATLSFSSAILDAAALGFLGLGVQPPTPEWGTMLASARDY-IERAWWVV 275

Query: 245 FFPGLALFAAVGCFTLLGDALRDLLDPR 272
             PGL +  +V    L+GD LRD LDP+
Sbjct: 276 SLPGLTILLSVLAINLMGDGLRDALDPK 303