Pairwise Alignments

Query, 280 a.a., ABC transporter, permease protein 2 (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

Subject, 298 a.a., D,D-dipeptide ABC transporter permease from Escherichia coli ECRC62

 Score =  219 bits (559), Expect = 4e-62
 Identities = 115/263 (43%), Positives = 162/263 (61%), Gaps = 1/263 (0%)

Query: 14  TGLLLLALFLAAALLGPALAPFDPLATDVLNRLQPPGAAHWFGTDALGRDLLSRVLVATR 73
           TG +++ L L   +  P LA  DP A D+  RL PP AAHWFGTD +GRDL SRVLV ++
Sbjct: 35  TGAVIIVLMLLMMIFSPWLATHDPNAIDLTARLLPPSAAHWFGTDEVGRDLFSRVLVGSQ 94

Query: 74  LDLGMAAGAVVLSLLLGSALGAWCGFVGGRIDRWIGRLVDVLMAFPLFVVAMALVAAWGN 133
             +      V ++ ++GS LG   G +GGR D  I R++D++++ P  V+ MAL AA G 
Sbjct: 95  QSILAGLVVVAIAGMIGSLLGCLSGVLGGRADAIIMRIMDIMLSIPSLVLTMALAAALGP 154

Query: 134 SVANIVYATALINLPFYIRLARSEVGVRRNAGYVLAARLGGATAPRLLFGVLLPHVLPML 193
           S+ N + A A++ +PFY+RLAR +  V R   YV AA+  GA+   L+   +L + LP L
Sbjct: 155 SLFNAMLAIAIVRIPFYVRLARGQALVVRQYTYVQAAKTFGASRWHLINWHILRNSLPPL 214

Query: 194 AVQGSINLGWALLNGAGLSFIGLGVRPPTAEWGVLVSEGAPYIITGQWWLAFFPGLALFA 253
            VQ S+++G A+L  A L FIGLG + P+AEWG +V+ G  Y++  QWW   FPG A+  
Sbjct: 215 IVQASLDIGSAILMAATLGFIGLGAQQPSAEWGAMVANGRNYVL-DQWWYCAFPGAAILL 273

Query: 254 AVGCFTLLGDALRDLLDPRGAAE 276
               F L GD +RDLLDP+   +
Sbjct: 274 TAVGFNLFGDGIRDLLDPKAGGK 296