Pairwise Alignments

Query, 345 a.a., ABC transporter, permease protein 1 (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

Subject, 333 a.a., ABC transporter, membrane spanning protein (peptide) from Agrobacterium fabrum C58

 Score =  176 bits (445), Expect = 1e-48
 Identities = 114/326 (34%), Positives = 170/326 (52%), Gaps = 18/326 (5%)

Query: 17  MLAALPVLAGAVVFTFLLTHVLPGDPAAFLASGPSAGPEE-IAQIRARMGLDQPLPVQLW 75
           ++ A+P +   V   F +  + PGD A ++A+   A  +E +A IR   GLD PL  QL 
Sbjct: 20  LIQAVPTMFVIVTLGFFVLQLAPGDAADYMAAESGAATQETVADIRRAFGLDLPLLDQLA 79

Query: 76  HYLAALAQGDWGQSHTTGQPVWTDLRQRLPATLELTFVAFTLTLAVALPLGAAAALRPRS 135
           +Y  +LA    G S   G PV   + +RLP TL L  +A  + L V +  G   AL    
Sbjct: 80  NYYTSLAHFSLGISPRYGVPVADLIMERLPGTLTLMVLAIVIALLVGIAAGTIMALNATR 139

Query: 136 IWDRACTLLTVGGSCMPTFVIALLLVYVFYFLLGWAPEPTGRIDAMLAPPPAVTGFLLVD 195
             DR  ++ ++    +PTF I L+ + VF   LGW P                 G +   
Sbjct: 140 AADRILSVASLLFYSVPTFWIGLIFIIVFSVKLGWLP----------------AGGMKTI 183

Query: 196 SLLAGRADAFASAAGRLLLPAVAMALFSLAPLARLMRASLLGVLRSDPVRTARALGL-PR 254
              +G            LLPA ++AL+ +A  ARL R+S+L V+  D VRTA+A GL PR
Sbjct: 184 GASSGGFGWLIDRVSYALLPATSLALYYMAIYARLTRSSILEVIGQDHVRTAKAKGLAPR 243

Query: 255 RAVLASALHLALLPVVTGAGMVFSYMLSANVVIEKVFAWPGIGSYALDALLASDHAPLQG 314
           + VL   L  AL+P+ T AG+  + +L   +VIE VF+WPG+G  A DA++A ++  L G
Sbjct: 244 QVVLRHVLRNALIPITTVAGIHVAGILGGAIVIETVFSWPGMGRLAFDAVMAREYTLLLG 303

Query: 315 FVLLVALLFVGVNLGVDLLHGRIDPR 340
            +L+ ++L + VN  VD++   +DPR
Sbjct: 304 IMLVSSVLVICVNAIVDIIQAALDPR 329