Pairwise Alignments

Query, 338 a.a., AraC-type DNA-binding domain-containing proteins from Variovorax sp. SCN45

Subject, 334 a.a., AraC family transcriptional regulator from Pseudomonas simiae WCS417

 Score = 80.9 bits (198), Expect = 4e-20
 Identities = 85/331 (25%), Positives = 131/331 (39%), Gaps = 6/331 (1%)

Query: 6   TVPVSFLRDMLTGARRQLRAQDID--AIATQAGISPLLLRQGAARVTREQFVRMYEGVAL 63
           T P S L       R+QL A  +D  A+  QAG+ P  +    AR       R++E    
Sbjct: 2   TEPTS-LASWTRALRKQLDALGLDSAALCLQAGLDPQKMDDPNARYPLSATTRLWELAVQ 60

Query: 64  FMGDEMLGLW-SRPIRAGALKYLGLSLLDAPSLMVAMYRFTRFWNLLLDDYRLRMARANG 122
             GD  +GL  SR + A     LG +L+ + SL     R  R+  ++ D   L ++    
Sbjct: 61  ASGDPAIGLRVSRFVSATTFHALGYALVASGSLREVFERIVRYHQVVSDALSLELSGDGE 120

Query: 123 VATVTIAPRLDGTTPTPFGHELMVKLIHGVASWLVGRQLPVLEVGFAFRRPARFDEYANL 182
                +        P     +    +        +GR+   L V      P     +  +
Sbjct: 121 RYRFRLLQLPGSPAPAFEAIDAFAAIYVRTCRNRLGREYAPLAVYLRRPEPVDPKPWHTV 180

Query: 183 FPGPVRFGQAASSVSFSEAVLRQTFRRTRGELLDFVRRAPDDWIFVTFDHDTTRSSVRDF 242
           F  PV F      + F+ A           EL +         +       T    VR  
Sbjct: 181 FRAPVFFDAEEDRLEFAAADFDSHLDDANPELAEHNETVLKRTL-AQLQPLTWERKVRAA 239

Query: 243 VAARLATGVTLGDA-ATSLHMSERALSRKLASEGTSFRAVKEEVRRDVAIQRLVKTREPI 301
           + A+L  G    +  A +LH+S R+L R LA EG  F A+  E R ++A+  L      +
Sbjct: 240 IEAQLPDGEPSAERIAQALHLSLRSLQRHLADEGCRFDALLSECRENLALLHLRDPHCSL 299

Query: 302 DLIAASVGFDNTPAFHRAFRTWTGSTPRGYR 332
             I+  +GF +T +F+RAF+ WTG TP  +R
Sbjct: 300 AEISHLLGFADTSSFNRAFKRWTGMTPGQFR 330