Pairwise Alignments

Query, 338 a.a., AraC-type DNA-binding domain-containing proteins from Variovorax sp. SCN45

Subject, 326 a.a., putative transcriptional regulator, AraC family from Pseudomonas putida KT2440

 Score = 95.5 bits (236), Expect = 2e-24
 Identities = 73/307 (23%), Positives = 129/307 (42%), Gaps = 3/307 (0%)

Query: 34  QAGISPLLLRQGAARVTREQFVRMYEGVALFMGDEMLGL-WSRPIRAGALKYLGLSLLDA 92
           Q G+    L    AR  ++   R+++      G+E +GL  +R +R  +   +G +L+ +
Sbjct: 4   QLGLDFAALDDPDARFPQDSMTRLWQLAVELSGNEAIGLNMARVVRPASFHVVGYALMSS 63

Query: 93  PSLMVAMYRFTRFWNLLLDDYRLRMARANGVATVTIAPRLDGTTPTPFGHELMVKLIHGV 152
            +L     R  R+  ++ +   L         ++ +    D   PT    E  +     +
Sbjct: 64  RTLAEGFERLVRYQRIIAESSDLSFVLGPEGYSLILTVHGDHLPPTRHSAEASLACALAL 123

Query: 153 ASWLVGRQLPVLEVGFAFRRPARFDEYANLFPGPVRFGQAASSVSFSEAVLRQTFRRTRG 212
             WL GR +    V     +P   + Y   F  P+ FG    ++ F  A +         
Sbjct: 124 CKWLSGRPVQPRRVLVQGPQPKNVEPYKVAFHSPLVFGAPHDALVFERADMEAPLPTANE 183

Query: 213 ELLDFVRRAPDDWIFVTFDHDTTRSSVRDFVAARLATGVTLGDA-ATSLHMSERALSRKL 271
            +     R   +++   F        VR  +   L  G    +  A +LH+S+R L R+L
Sbjct: 184 AMAVLHDRFAGEYL-ARFSESRVSHRVRQVLCRILPQGEPKRETLAQALHLSQRTLQRRL 242

Query: 272 ASEGTSFRAVKEEVRRDVAIQRLVKTREPIDLIAASVGFDNTPAFHRAFRTWTGSTPRGY 331
             EGTSF+ + ++ RR++A Q L +    +   A  +GF +   F+RAFR W  +TP  Y
Sbjct: 243 QEEGTSFQTLLDDTRRELAEQYLAQPGMTLLETAYLLGFADPSNFYRAFRRWFDATPSEY 302

Query: 332 RLRASSD 338
           R R  ++
Sbjct: 303 RARLGAE 309