Pairwise Alignments

Query, 338 a.a., AraC-type DNA-binding domain-containing proteins from Variovorax sp. SCN45

Subject, 340 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

 Score =  120 bits (301), Expect = 5e-32
 Identities = 86/334 (25%), Positives = 159/334 (47%), Gaps = 6/334 (1%)

Query: 1   MQERATVPVSFLRDMLTGARRQLRAQDIDA-IATQAGISPLLLRQGAARVTREQFVRMYE 59
           M ++ T+ +  +R+ L    +   A + D+ +  +AGI+   L    ARV+ E + R++ 
Sbjct: 1   MSDKDTISMQLVREALL---QTCPAGEPDSGLLARAGIAVEQLHLPEARVSAESYARLWR 57

Query: 60  GVALFMGDEMLGLWSRPIRAGALKYLGLSLLDAPSLMVAMYRFTRFWNLLLDDYRLRMAR 119
            +A    DE   + +R + +G+L ++  + +  P+L   +     F +L+L D +  + R
Sbjct: 58  LLARRCNDEFFAMDTRGLCSGSLAFMCRASMGQPTLGAGLETSLAFLSLMLQDMQPSLVR 117

Query: 120 ANGVATVTIAPRLDGTTPTPFGHELMVKLIHGVASWLVGRQLPVLEVGFAFRRPARFDEY 179
             G+A + I    D      F +     ++HGV  WL GR++P+L +      P   D+Y
Sbjct: 118 QQGLAEIVINEPRDEPRRA-FTYFTFWMIVHGVTCWLAGRRIPILSIDLRCAEPPFCDDY 176

Query: 180 ANLFPGPVRFGQAASSVSFSEAVLRQTFRRTRGELLDFVRRAPDDWIFVTFDHDTTRSSV 239
             +F   + F +  + +  +   L    RR+  EL  F+  AP + +    D  +    +
Sbjct: 177 RVMFSENLHFERPRTRMIIASQYLDLPLRRSEEELQRFLAEAPGNILVKYRDPASLGRRI 236

Query: 240 R-DFVAARLATGVTLGDAATSLHMSERALSRKLASEGTSFRAVKEEVRRDVAIQRLVKTR 298
           R D +             A  L +S   L R+LA EG +++ +K+ VRR++AI  L +  
Sbjct: 237 RTDLLRLAPEQWPDADRLARQLCLSPSTLRRRLAEEGQNYQGLKDSVRRELAIAWLSQED 296

Query: 299 EPIDLIAASVGFDNTPAFHRAFRTWTGSTPRGYR 332
             +  +A  +GF ++ +F++AFR W G  P  YR
Sbjct: 297 VAMGELAERLGFADSSSFYKAFRKWFGCNPGHYR 330