Pairwise Alignments

Query, 476 a.a., ATP-dependent 23S rRNA helicase DbpA from Variovorax sp. SCN45

Subject, 442 a.a., DEAD/DEAH box helicase from Rhodanobacter sp000427505 FW510-R12

 Score =  280 bits (717), Expect = 5e-80
 Identities = 164/364 (45%), Positives = 220/364 (60%), Gaps = 10/364 (2%)

Query: 17  FAALALSPQMLANLTQLGYTQMTPIQAAALPPALLGKDLIAQAKTGSGKTAAFALALLAN 76
           F +L L+P +L  L   GYTQ TPIQAAA+PPAL G DL+A A+TG+GKTAAFAL LL  
Sbjct: 3   FDSLGLAPALLRALADYGYTQPTPIQAAAIPPALEGHDLLAAAQTGTGKTAAFALPLLQK 62

Query: 77  LNARRFAI----QAMVLCPTRELADQVTTEIRRLARAEENIKVVTLCGGVALRGQVASLE 132
           L+     +    +A++L PTRELA Q+   +R   +   ++   T+ GGV +  Q+ +L 
Sbjct: 63  LSTSGQTMTRRPRALILTPTRELAAQIHENMRDYGK-HIHVSAATIFGGVGMGPQINALR 121

Query: 133 HGAHIVVGTPGRIMDHLERENLDLSALNTLVLDEADRMLDMGFFDDIVTVARQCPKERQT 192
            G  +V+ TPGR++DHL++  LDLSA+ TLVLDEADRMLDMGF   +  + +  PK+RQT
Sbjct: 122 RGVDVVIATPGRLIDHLQQRTLDLSAVETLVLDEADRMLDMGFLPALKRILQSVPKKRQT 181

Query: 193 LLFSATYPEGIAKLAQQFMKNPEQITVQAQHEGSKIRQRWYQIKDSERLHAVSL-LLDHF 251
           LLFSAT+   I  LA  FM NP +I+V A +  + +        D+ R   + L +L   
Sbjct: 182 LLFSATFAPAIKALALDFMHNPREISVSAPNTVTTLVSHQVHPVDASRKRDLLLHVLSQD 241

Query: 252 RPVSTLAFCNTKQQCRDLVDVLQAQGFSALALFGELEQRERDQVLVQFANRSCSVLVATD 311
               TL F  TK     LV  L A G  A A+ G   Q  R + L  F +   +VLVATD
Sbjct: 242 SRRQTLVFSRTKHGADKLVTFLNASGLRAAAIHGNKSQNARTRALADFKSGRVTVLVATD 301

Query: 312 VAARGLDISQLEAVINVDVTPDSEIHIHRVGRTGRVGQQGAAEGLALNLASMNEMGFVGK 371
           +AARG+DI QL  VIN D+   +E ++HR+GRTGR G     EGLAL+L S +E G +  
Sbjct: 302 IAARGIDIEQLPIVINFDLPSVAEDYVHRIGRTGRAGM----EGLALSLVSHDESGLLFD 357

Query: 372 IEQL 375
           I +L
Sbjct: 358 IRKL 361