Pairwise Alignments

Query, 516 a.a., ABC transporter, ATP-binding protein (cluster 2, ribose/xylose/arabinose/galactose) / ABC transporter, ATP-binding protein (cluster 2, ribose/xylose/arabinose/galactose) from Variovorax sp. SCN45

Subject, 502 a.a., ribonucleotide-diphosphate reductase subunit alpha from Pseudomonas simiae WCS417

 Score =  353 bits (905), Expect = e-101
 Identities = 202/481 (41%), Positives = 293/481 (60%), Gaps = 4/481 (0%)

Query: 17  LLEMRSIRKVFGAVTVLRDVSLQCRAGQVHAICGENGAGKSTLMKVLGGIHAPDGGEIRI 76
           LL++ +I K +  V  L+ ++LQ   G++HA+ GENGAGKSTLMK+LGG+   D G+I I
Sbjct: 4   LLKLENICKRYPGVQALKSINLQVERGEIHALLGENGAGKSTLMKILGGVEHQDEGQILI 63

Query: 77  GGRPVRFGHPSAARQAGIAIIHQELALLPHRTVAQNIFLGHEPS-RWGVIDRKAMNAGAE 135
            G+  +F     A  AGI I+ QE +L+P+ T  +NIFLGHE S R+G++ ++ M   +E
Sbjct: 64  DGQAQQFATYRDAIAAGIGIVFQEFSLIPYLTAVENIFLGHELSNRFGLLRKREMVEASE 123

Query: 136 AALRRVGCRIDPRTECGRLSVAEQQMVEIAKAVSLDARILVLDEPTAALDDVESRKLFDL 195
           A  +R+G  ID +     LSVAEQQ VEIAKA++LDAR+LVLDEPTA L   E+  LF++
Sbjct: 124 ALFKRLGVTIDLQCAVKHLSVAEQQFVEIAKALALDARLLVLDEPTATLTPSEAELLFEI 183

Query: 196 IAELRRAGVAMLYISHRMAEVMALADDISVIKDGQLMATLPAAEATVERIVRLMVGRELS 255
           + EL+R GVA+++ISH + E+  + D ISV++DG  +     A++ ++ +V +MVGR L+
Sbjct: 184 MRELKRQGVAVIFISHHLEEIFQVCDRISVLRDGGNVGVTDVADSDIDHLVEMMVGRRLA 243

Query: 256 DFYPPAAANPPGAEVFAVEQGGNEVLHGIDLR--LHAGEIVGVAGLEASGKVELARALFG 313
             +PP      G  +  V+     V +G   R  LH GEI+G AGL  SG+ ELA  + G
Sbjct: 244 CSFPPKPTRERGPLLLEVKD-IQLVRNGPHNRFQLHKGEILGFAGLVGSGRTELALGMMG 302

Query: 314 ERRFTRGTVRAWDDKGAARSPREAARRGIGYLPDDRKREGLGLQQSLRDNAALTLRALAG 373
                   V    +K     P +A   GIG LP+ RK EGL    S+R+N +L       
Sbjct: 303 ALPSVSKDVWLRGEKITLDDPAQALAHGIGLLPESRKSEGLITDFSIRENISLNNLPKYQ 362

Query: 374 PLAGAGSAARSRSLIDALLNKVEVRAADFDMPVGALSGGNQQKVMVARWMAREPRLWVIC 433
             +G     R  + ++ L+ ++ ++A   +  V  LSGGNQQKV++ARW+     + V  
Sbjct: 363 NASGLIDKNRECASVEGLMKQLSIKAPSSESRVFNLSGGNQQKVVIARWINHHCDVLVFD 422

Query: 434 EPTRGIDVGAKATIYRLLRAYADAGGAVLVVSSDVAEIIGLCDRICVMALGRIVAHLPRG 493
           EPTRGIDVGAKA IY L+R+  + G A++++SS++ EIIG+CDR+ V   G IV  L   
Sbjct: 423 EPTRGIDVGAKAQIYALMRSLTEQGYAIIMISSELPEIIGMCDRVAVFHKGAIVKLLEAS 482

Query: 494 A 494
           A
Sbjct: 483 A 483



 Score = 73.2 bits (178), Expect = 2e-17
 Identities = 60/253 (23%), Positives = 115/253 (45%), Gaps = 14/253 (5%)

Query: 8   PTAARDAAPLL-EMRSIRKVFGAVTVLRDVSLQCRAGQVHAICGENGAGKSTLMKVLGGI 66
           P   R+  PLL E++ I+ V            Q   G++    G  G+G++ L   + G 
Sbjct: 248 PKPTRERGPLLLEVKDIQLVRNGP----HNRFQLHKGEILGFAGLVGSGRTELALGMMGA 303

Query: 67  HAPDGGEIRIGGRPVRFGHPSAARQAGIAIIHQEL---ALLPHRTVAQNIFLGHEP---S 120
                 ++ + G  +    P+ A   GI ++ +      L+   ++ +NI L + P   +
Sbjct: 304 LPSVSKDVWLRGEKITLDDPAQALAHGIGLLPESRKSEGLITDFSIRENISLNNLPKYQN 363

Query: 121 RWGVIDRKAMNAGAEAALRRVGCRIDPRTECG--RLSVAEQQMVEIAKAVSLDARILVLD 178
             G+ID+    A  E  ++++  +  P +E     LS   QQ V IA+ ++    +LV D
Sbjct: 364 ASGLIDKNRECASVEGLMKQLSIKA-PSSESRVFNLSGGNQQKVVIARWINHHCDVLVFD 422

Query: 179 EPTAALDDVESRKLFDLIAELRRAGVAMLYISHRMAEVMALADDISVIKDGQLMATLPAA 238
           EPT  +D     +++ L+  L   G A++ IS  + E++ + D ++V   G ++  L A+
Sbjct: 423 EPTRGIDVGAKAQIYALMRSLTEQGYAIIMISSELPEIIGMCDRVAVFHKGAIVKLLEAS 482

Query: 239 EATVERIVRLMVG 251
               + ++R   G
Sbjct: 483 AVNPQEVMRHATG 495