Pairwise Alignments

Query, 516 a.a., ABC transporter, ATP-binding protein (cluster 2, ribose/xylose/arabinose/galactose) / ABC transporter, ATP-binding protein (cluster 2, ribose/xylose/arabinose/galactose) from Variovorax sp. SCN45

Subject, 510 a.a., D-ribose transporter ATP-binding protein from Pseudomonas simiae WCS417

 Score =  380 bits (977), Expect = e-110
 Identities = 217/496 (43%), Positives = 311/496 (62%), Gaps = 11/496 (2%)

Query: 16  PLLEMRSIRKVFGAVTVLRDVSLQCRAGQVHAICGENGAGKSTLMKVLGGIHAPD-GGEI 74
           PLLEM+ I K F  + VL+ V L+   G++HA+ GENGAGKSTLMK+L G +  D GGEI
Sbjct: 5   PLLEMQGISKTFNGLRVLKTVGLKVYPGEIHALMGENGAGKSTLMKILSGAYQADPGGEI 64

Query: 75  RIGGRPVRFGHPSAARQAGIAIIHQELALLPHRTVAQNIFLGHEPSRWGVIDRKAMNAGA 134
           RI G+ +    P+ A+  GIA+I+QEL+L P+ +VA+NI+LG E  R   IDRK M AG 
Sbjct: 65  RIAGQLIPTFDPATAKALGIAVIYQELSLCPNLSVAENIYLGRELRRGWTIDRKGMEAGC 124

Query: 135 EAALRRVGCRIDPRTECGRLSVAEQQMVEIAKAVSLDARILVLDEPTAALDDVESRKLFD 194
              L+R+G    P T    LS+AE+Q+VEIA+A+   A+ILV+DEPT  L   E+ +LF 
Sbjct: 125 IEVLQRLGAEFTPATRVSSLSIAERQLVEIARALHAHAKILVMDEPTTPLSSRETDRLFA 184

Query: 195 LIAELRRAGVAMLYISHRMAEVMALADDISVIKDGQLMATLPAAEATVERIVRLMVGREL 254
           LI +LR  G+A++YISHRMAE+ AL+D +SV++DG  +  L     + E +V++MVGR+L
Sbjct: 185 LIKQLRSQGLAIIYISHRMAEIYALSDRVSVLRDGHYIGELTRDALSAEALVKMMVGRDL 244

Query: 255 SDFYPPA-AANPPGAEVFAVEQ--GGNEVLHGIDLRLHAGEIVGVAGLEASGKVELARAL 311
           S FY    AA  PG  V  V     G  V H     LHAGE++G+AGL  +G+ ELAR +
Sbjct: 245 SGFYKKEHAAYNPGNVVMRVRDMADGKRVRH-CSFDLHAGEVLGIAGLVGAGRTELARLI 303

Query: 312 FGERRFTRGTVRAWDDK-GAARSPREAARRGIGYLPDDRKREGLGLQQSLRDNAALTLRA 370
           F     T GT+          R+P +A R G+ YL +DRK +GL L  S+ DN  + + A
Sbjct: 304 FAADPRTSGTLEVVGKAVTPLRTPADAIRAGVVYLTEDRKAQGLFLDMSVADN--INVCA 361

Query: 371 LAGPLAGAGSAARSRSL--IDALLNKVEVRAADFDMPVGALSGGNQQKVMVARWMAREPR 428
                   G   R  +L   +  +  + +R A   +  GALSGGNQQKV++AR +  +P 
Sbjct: 362 CVPDAHAGGVLDRDHALQRSNDAIKSLSIRVASGKVNAGALSGGNQQKVLLARLLEVKPH 421

Query: 429 LWVICEPTRGIDVGAKATIYRLLRAYADAGGAVLVVSSDVAEIIGLCDRICVMALGRIVA 488
           + ++ EPTRG+D+G+K+ IYR++   A AG  ++V+SS++ EIIG CDR+ +M  G++VA
Sbjct: 422 VLILDEPTRGVDIGSKSEIYRIINQLAQAGIGIVVISSELPEIIGTCDRVLIMREGQLVA 481

Query: 489 HLPRGASEEAVIAQAV 504
            +  GAS +A+  + +
Sbjct: 482 EV-GGASGQAISQERI 496