Pairwise Alignments

Query, 516 a.a., ABC transporter, ATP-binding protein (cluster 2, ribose/xylose/arabinose/galactose) / ABC transporter, ATP-binding protein (cluster 2, ribose/xylose/arabinose/galactose) from Variovorax sp. SCN45

Subject, 512 a.a., ribose ABC transporter - ATP-binding subunit from Pseudomonas putida KT2440

 Score =  345 bits (884), Expect = 3e-99
 Identities = 209/503 (41%), Positives = 293/503 (58%), Gaps = 7/503 (1%)

Query: 14  AAPLLEMRSIRKVFGAVTVLRDVSLQCRAGQVHAICGENGAGKSTLMKVLGGIHAPDGGE 73
           + P+LE+R I K FGA   L   SL+  AG VH + GENGAGKSTL+KVL GIH PD G 
Sbjct: 2   STPVLELRGIVKTFGATRALDGASLRVAAGSVHGLVGENGAGKSTLIKVLAGIHRPDAGS 61

Query: 74  IRIGGRPVRFGHPSAARQAGIAIIHQELALLPHRTVAQNIFLGHEPSRWGVIDRKAMNAG 133
           + + G+P     P    + GI  IHQE  L    TV + +F GHE     ++DR++    
Sbjct: 62  LLLDGQPHGHFSPRQVERLGIGFIHQERLLPARFTVGEALFFGHERRFGPLLDRRSQQRE 121

Query: 134 AEAAL-RRVGCRIDPRTECGRLSVAEQQMVEIAKAVSLDARILVLDEPTAALDDVESRKL 192
           A   L    G R+      G LS AEQQMV+I +A+ +  R+LV DEP+ AL   E  +L
Sbjct: 122 AARLLDDYFGLRLPANALIGELSSAEQQMVQIVRALLIKPRVLVFDEPSVALVQREVERL 181

Query: 193 FDLIAELRRAGVAMLYISHRMAEVMALADDISVIKDGQLMATLPAAEATVERIVRLMVGR 252
             ++  LR  G+A++YISH + E+ AL D ++V+++G+ +A +     ++E+I RLMV R
Sbjct: 182 LRIVQRLRDDGLAIVYISHYLQEIEALCDRVTVLRNGRDVAEVSPRNTSLEQITRLMVNR 241

Query: 253 ELSDFYPPAAANPPGAEVFAVE-QGGNEVLHGIDLRLHAGEIVGVAGLEASGKVELARAL 311
           E+ + YP  A  P GA +  V   G      GIDL++  GEIVG+ GL  SG  EL R+L
Sbjct: 242 EVGELYPKVAV-PAGALLLDVRGLGRARAYQGIDLQVRRGEIVGLTGLVGSGAKELLRSL 300

Query: 312 FGERRFTRGTVRAWDDKGAARSPREAARRGIGYLPDDRKREGLGLQQSLRDNAALTLRAL 371
           FG      G VR      + RSPREA  +G+  +P++R+R+G+ L  S+++N   TL AL
Sbjct: 301 FGLAPPDSGEVRLDGQPLSLRSPREAVAQGVALMPEERRRQGVALDLSVQENT--TLAAL 358

Query: 372 AGPL-AGAGSAARSRSLIDALLNKVEVRAADFDMPVGALSGGNQQKVMVARWMAREPRLW 430
           +  +  G  S AR R     L+ ++ ++A      V  LSGGNQQKV +A+W AR   L+
Sbjct: 359 SRFVRLGLLSPARERHTTLELIERLRIKAHGAHAKVRQLSGGNQQKVALAKWFARCSSLY 418

Query: 431 VICEPTRGIDVGAKATIYRLLRAYADAGGAVLVVSSDVAEIIGLCDRICVMALGRIVAHL 490
           ++ EP+ GIDVGAK  IYRL+      G  VL++SSD+ E+IGLCDRI VM  G I A  
Sbjct: 419 LLDEPSVGIDVGAKVEIYRLIGELVKEGAGVLILSSDLPELIGLCDRIHVMHRGAIAARF 478

Query: 491 PRG-ASEEAVIAQAVRHDVAEAE 512
             G A+ + ++A A     A+ E
Sbjct: 479 AAGEANSDRLLAVATGAQRAQNE 501