Pairwise Alignments
Query, 516 a.a., ABC transporter, ATP-binding protein (cluster 2, ribose/xylose/arabinose/galactose) / ABC transporter, ATP-binding protein (cluster 2, ribose/xylose/arabinose/galactose) from Variovorax sp. SCN45
Subject, 506 a.a., Ribose import ATP-binding protein RbsA from Escherichia coli ECRC101
Score = 367 bits (941), Expect = e-106
Identities = 203/482 (42%), Positives = 300/482 (62%), Gaps = 8/482 (1%)
Query: 13 DAAPLLEMRSIRKVFGAVTVLRDVSLQCRAGQVHAICGENGAGKSTLMKVLGGIHAPDGG 72
++ P+LEMR+I K FG L+ V L G++HA+ GENGAGKSTLMKVL G + G
Sbjct: 2 NSTPVLEMRNIAKAFGKFYALKGVDLTVYPGEIHALMGENGAGKSTLMKVLAGAYTATSG 61
Query: 73 EIRIGGRPVRFGHPSAARQAGIAIIHQELALLPHRTVAQNIFLGHEPSRWGVIDRKAMNA 132
EI I G+P P A AGI +I+QE+ L P+ +VA+NIFLG E S G++ RK M
Sbjct: 62 EILIDGKPFHIRTPKDALSAGITLIYQEMQLAPNLSVAENIFLGSELSHGGLVQRKEMLV 121
Query: 133 GAEAALRRVGCRIDPRTECGRLSVAEQQMVEIAKAVSLDARILVLDEPTAALDDVESRKL 192
A+ + R+G + + + L++AEQQ VEIA+A+ ++RILV+DEPTAAL E+ +L
Sbjct: 122 QAQKVIDRLGAQFNASDKVMTLTIAEQQQVEIARALHRNSRILVMDEPTAALSSRETHRL 181
Query: 193 FDLIAELRRAGVAMLYISHRMAEVMALADDISVIKDGQLMATLPAAEATVERIVRLMVGR 252
F+LI LR G+A++YISHRMAEV L+D +SV++DGQ + +L +VR+MVGR
Sbjct: 182 FELIMRLRDEGMAIIYISHRMAEVYELSDRVSVLRDGQYVGSLTRDNLNAGELVRMMVGR 241
Query: 253 ELSDFYPPAAANPPG---AEVFAVEQGGNEVLHGIDLRLHAGEIVGVAGLEASGKVELAR 309
LSD + P G V + GG + L + +GEIVG+AGL +G+ ELA+
Sbjct: 242 PLSDLFNKERDIPLGKARLNVHHLTDGGK--VQPSSLLVRSGEIVGLAGLVGAGRSELAQ 299
Query: 310 ALFGERRFTRGTVRAWDDKGAARSPREAARRGIGYLPDDRKREGLGLQQSLRDNAALTLR 369
+FG R+ T G + + SPREA GIG+L ++RK +GL L+ + +N +T+
Sbjct: 300 LIFGVRKATGGMIEVDGEPVVIHSPREAIDLGIGFLTENRKEQGLFLEMAAAEN--ITMA 357
Query: 370 ALAGPLA-GAGSAARSRSLIDALLNKVEVRAADFDMPVGALSGGNQQKVMVARWMAREPR 428
L G + +++++ D + + +R + G LSGGNQQK++++RW+A PR
Sbjct: 358 TLERDARWGMLNRKKAQTISDDAIKLLNIRVPHAQVRAGGLSGGNQQKLLISRWVAIGPR 417
Query: 429 LWVICEPTRGIDVGAKATIYRLLRAYADAGGAVLVVSSDVAEIIGLCDRICVMALGRIVA 488
+ ++ EP RG+DVGAK+ IYR++ A G A+L++SS++ EI+G+ DR+ VM G I
Sbjct: 418 ILLLDEPARGVDVGAKSEIYRIMNEMARKGVAILMISSELPEIVGMSDRVYVMREGSIAG 477
Query: 489 HL 490
L
Sbjct: 478 EL 479
Score = 110 bits (274), Expect = 2e-28
Identities = 66/221 (29%), Positives = 116/221 (52%), Gaps = 6/221 (2%)
Query: 37 SLQCRAGQVHAICGENGAGKSTLMKVLGGIHAPDGGEIRIGGRPVRFGHPSAARQAGIAI 96
SL R+G++ + G GAG+S L +++ G+ GG I + G PV P A GI
Sbjct: 275 SLLVRSGEIVGLAGLVGAGRSELAQLIFGVRKATGGMIEVDGEPVVIHSPREAIDLGIGF 334
Query: 97 I---HQELALLPHRTVAQNIFLG--HEPSRWGVIDRKAMNAGAEAALRRVGCRID-PRTE 150
+ +E L A+NI + +RWG+++RK ++ A++ + R+ +
Sbjct: 335 LTENRKEQGLFLEMAAAENITMATLERDARWGMLNRKKAQTISDDAIKLLNIRVPHAQVR 394
Query: 151 CGRLSVAEQQMVEIAKAVSLDARILVLDEPTAALDDVESRKLFDLIAELRRAGVAMLYIS 210
G LS QQ + I++ V++ RIL+LDEP +D +++ ++ E+ R GVA+L IS
Sbjct: 395 AGGLSGGNQQKLLISRWVAIGPRILLLDEPARGVDVGAKSEIYRIMNEMARKGVAILMIS 454
Query: 211 HRMAEVMALADDISVIKDGQLMATLPAAEATVERIVRLMVG 251
+ E++ ++D + V+++G + L T E I+ L G
Sbjct: 455 SELPEIVGMSDRVYVMREGSIAGELNGKNITQENIMTLATG 495
Score = 71.2 bits (173), Expect = 8e-17
Identities = 59/214 (27%), Positives = 97/214 (45%), Gaps = 11/214 (5%)
Query: 281 LHGIDLRLHAGEIVGVAGLEASGKVELARALFGERRFTRGTVRAWDDKGAARSPREAARR 340
L G+DL ++ GEI + G +GK L + L G T G + R+P++A
Sbjct: 22 LKGVDLTVYPGEIHALMGENGAGKSTLMKVLAGAYTATSGEILIDGKPFHIRTPKDALSA 81
Query: 341 GIGYLPDDRKREGLGLQQSLRDNAALTLRALAGPLAGAGSAARSRSLIDALLNKVEVRAA 400
GI + + + L S+ +N L L+ G R L+ A ++ A
Sbjct: 82 GITLIYQEMQ---LAPNLSVAENIFL-----GSELSHGGLVQRKEMLVQAQ-KVIDRLGA 132
Query: 401 DFDMP--VGALSGGNQQKVMVARWMAREPRLWVICEPTRGIDVGAKATIYRLLRAYADAG 458
F+ V L+ QQ+V +AR + R R+ V+ EPT + ++ L+ D G
Sbjct: 133 QFNASDKVMTLTIAEQQQVEIARALHRNSRILVMDEPTAALSSRETHRLFELIMRLRDEG 192
Query: 459 GAVLVVSSDVAEIIGLCDRICVMALGRIVAHLPR 492
A++ +S +AE+ L DR+ V+ G+ V L R
Sbjct: 193 MAIIYISHRMAEVYELSDRVSVLRDGQYVGSLTR 226