Pairwise Alignments

Query, 314 a.a., Ribose ABC transport system, permease protein RbsC (TC 3.A.1.2.1) from Variovorax sp. SCN45

Subject, 331 a.a., Predicted ABC-type sugar transport system, permease component from Enterobacter asburiae PDN3

 Score =  147 bits (370), Expect = 4e-40
 Identities = 83/301 (27%), Positives = 161/301 (53%), Gaps = 8/301 (2%)

Query: 11  LVLLVVLVCTMVFMSPLYQTAPGLMSFLQRAAPLVILTCGASFVLIAGGFDLSSGALITL 70
           L +L+++V    F++P + T   L++  ++A+  ++L  G +F+++ GG DLS G+++  
Sbjct: 31  LPILILIVAVFGFIAPNFFTESNLLNITRQASINIVLAAGMTFIILTGGIDLSVGSILGT 90

Query: 71  VVIGCALITNGDADMTWTAVAAAYAMGLAVGLLNGLVVTRLKVPSIIATLGGLLSIKGIA 130
             +  A++ +   +    ++ AA  +G+ +GL NG +V    +P  I TLG   +++G A
Sbjct: 91  TAVA-AMVVSLIPEFAMLSIPAALMLGMVLGLFNGALVAFAGLPPFIVTLGTYTALRGAA 149

Query: 131 MVWSGGAPSGYLPQNLRYLGRGVLREVPLTGTLPIAVIVLAVFVALCFWLMHRTNFGRLV 190
            + + G        +  ++G   L      G +P  V++    +A+C++++ RT  G  +
Sbjct: 150 YLLADGTTVINSNISFEWIGNNYL------GPIPWLVVIALAVIAICWFILRRTTLGVHI 203

Query: 191 LMIGDNPVAAELAGAPVRRVRVAAFVLSSLSAVTAGILLGG-FSGVSVDVGTGYDLQAIA 249
             +G N  AA L G  V  V +  + +S L +   G++        + ++GTGY+L AIA
Sbjct: 204 YAVGGNMQAARLTGIKVWLVLLFVYGMSGLLSGLGGVMSASRLYSANGNLGTGYELDAIA 263

Query: 250 AAVIGGVVLLGGRGSIPGACIGALTLYTLFTVLNLLGFSEPLRVAVQGLILIGAAALTAW 309
           A ++GG   +GG G+I G  +GAL + TL   + L+G S   ++ ++G ++I A  +  +
Sbjct: 264 AVILGGTSFVGGIGTITGTLVGALIIATLNNGMTLMGVSYFWQLVIKGAVIIIAVLIDKY 323

Query: 310 R 310
           R
Sbjct: 324 R 324