Pairwise Alignments

Query, 386 a.a., ABC transporter, substrate-binding protein (cluster 2, ribose/xylose/arabinose/galactose) from Variovorax sp. SCN45

Subject, 308 a.a., rhizopine-binding protein from Pseudomonas simiae WCS417

 Score = 60.5 bits (145), Expect = 6e-14
 Identities = 60/248 (24%), Positives = 106/248 (42%), Gaps = 9/248 (3%)

Query: 103 EVELNKADIKGFEYADAQGKDEKQISDIRSLVNSGKCDALIVSPNTSAALTPAVEEA-CK 161
           E    + D++  ++ DAQG   +Q++ +   +N  K DA+IV P  +AA       A   
Sbjct: 45  EAAARQQDVQ-IQFEDAQGDVVRQLNQVEGFLNQ-KVDAVIVLPVDTAATANMTRAAVAA 102

Query: 162 KLPVVTFDRSVDSLCPVTAVRSIGG--YAWGKVGADFIAANAPKGGKVLVLRTAPGVDLF 219
           K P+V  +R  D       V ++       G++   ++A      G V ++      +  
Sbjct: 103 KTPLVYVNRHPDERTLPKGVVTVASNDIEAGQLQMRYLAEKLAGKGNVAIIMGDLAQNAT 162

Query: 220 ETRWAAAKKVF-DASGLKVVGNEFVGGDRAKTKATVADYLSRSGKIDAVWVDLGAVSVAV 278
             R   AK+V  D  G+KVV  +     R+K     +++L    + DA+  +   +++  
Sbjct: 163 HDRTEGAKQVLKDFPGIKVVEQQSADWQRSKGMDLTSNWLLAGTQFDAIVANNDEMAIGA 222

Query: 279 AEAFEDAGQ---PYPIITGEDQQDYLQAWKKNGFKGIAPTYPAYQWRTAVIAALKALKGE 335
           A A + AG+      I+  +   D L A K+          P  Q   AV AA++ +KGE
Sbjct: 223 AMALQQAGKAKGDVAIVGIDGLPDGLAAIKRGLLTASVFQDPKAQATQAVQAAVRMIKGE 282

Query: 336 PLPSPTWI 343
            +    W+
Sbjct: 283 AIEPEVWV 290