Pairwise Alignments

Query, 386 a.a., ABC transporter, substrate-binding protein (cluster 2, ribose/xylose/arabinose/galactose) from Variovorax sp. SCN45

Subject, 340 a.a., sugar ABC transporter substrate-binding protein from Agrobacterium fabrum C58

 Score = 70.5 bits (171), Expect = 7e-17
 Identities = 69/271 (25%), Positives = 119/271 (43%), Gaps = 9/271 (3%)

Query: 70  TAKYRKKGPYTLCFSNASVGNPWRVVGWNTMQAEVEL-NKADIKGFEYADAQGKD-EKQI 127
           T+ + ++  + +  SN+ VG+ WR       QA  +   +  +K      +   D + QI
Sbjct: 17  TSVHAQEQSFKIGLSNSFVGSEWRTQMIEEAQAAAKAWGEKGVKVEVVVQSGNVDVQGQI 76

Query: 128 SDIRSLVNSGKCDALIVSPNTSAALTPAVEEA-CKKLPVVTFDRSVDSLCPVTAVRSIGG 186
             IR+ +N G  DA++++P +  A  P   +A  + + V+  D  V S   +     I  
Sbjct: 77  GHIRNFMNQG-VDAILINPGSPTAFDPIFAQAKARNILVIATDAEVSSKDALYV--GIDQ 133

Query: 187 YAWGKVGADFIAANAPKGGKVLVLRTAPGVDLFETRWAAAKKVFDA-SGLKVVGNEFVGG 245
            AW    A ++A      G V+ +    G    E R A  ++VF     +KV+       
Sbjct: 134 KAWAAQSAQWLADALKGKGSVVAINGIAGNPANEARVAGYREVFKKYPDIKVLNEANASW 193

Query: 246 DRAKTKATVADYLSRSGKIDAVWVDLGAVSVAVAEAFEDAGQPYPII-TGEDQQDYLQAW 304
           D+A+ +  + + L+    I  VWV  G    A   A E AG+   I  TGE ++D++  W
Sbjct: 194 DQAQGQQAMQNLLATYPDISGVWVQDGMADGAW-RAIEAAGKTKDIAATGEIRKDFMTRW 252

Query: 305 KKNGFKGIAPTYPAYQWRTAVIAALKALKGE 335
           +K  F   A   P     +A+  A+  L+G+
Sbjct: 253 EKEKFNSGASVNPPGVMASALNVAVLKLQGK 283