Pairwise Alignments

Query, 571 a.a., Oxidoreductase, GMC family from Variovorax sp. SCN45

Subject, 548 a.a., choline dehydrogenase from Pseudomonas simiae WCS417

 Score =  172 bits (435), Expect = 4e-47
 Identities = 171/595 (28%), Positives = 247/595 (41%), Gaps = 113/595 (18%)

Query: 6   DYLILGGGTAGCALAARLSEDAGKRVVLVEAGRDLRPDAMSDSIRSRYPGL----AYL-- 59
           DY+++G G AGC LA RLS +   RV+L+EAG            R  YP +     YL  
Sbjct: 9   DYIVVGAGPAGCLLANRLSANPAHRVLLLEAGG-----------RDNYPWIHIPVGYLFC 57

Query: 60  --DKQNIWTALVATVSGAPTRQPNRTPRGYEQGRVLGGGSAINAMVANRGAPDDYDEWAR 117
             + +  W        G   R  +     Y +G+VLGG S+IN M+  RG   DYD WA 
Sbjct: 58  IGNPRTDWCFKTEAQEGLQGRALS-----YPRGKVLGGCSSINGMIYMRGQAQDYDGWAA 112

Query: 118 LGAEGWSGEVALKYFRKLERDCDFDDAYHGRGGPVPVRRLAPERVS-PFVQAVCRSLRMR 176
            G  GW+ +  L  F++ E        +H  GG     R+  +R+  P + A   +    
Sbjct: 113 EGNAGWAWKDVLPLFKQSENHFAGGSEFHSDGGE---WRVEQQRLHWPILDAFRDAAAQS 169

Query: 177 GHPQYPDQNGEWKDGVFPAAIATSDDGQRVPASIVYLTPEVRARKNLRIVTDTHVQRLLF 236
           G     D N    +G     +     G R  A+  +L P VR R NL ++TD  V R+L 
Sbjct: 170 GIAPVNDFNQGDNEGCGYFQV-NQKAGVRWNAAKAFLKP-VRQRPNLTVLTDVDVNRVLL 227

Query: 237 EGAR---VTGAEAGGQPMHAA--HTIVCMGGIHSAALLMRSGIGPAADLRALGIEVKADR 291
           E  R   V   + G Q    A    ++C G + S  +L RSGIGP+  L+ LGI+V  + 
Sbjct: 228 ENGRASQVIARQHGQQVSWKARKEIVLCAGSVGSPGILQRSGIGPSNVLKPLGIDVLHEL 287

Query: 292 PGVGMNLMEHPLTAVSTYLPPASRMKDLAEHHDQAL---LRYT----------------- 331
           PGVG NL +H    +   L  A  +  +A      +   LRY                  
Sbjct: 288 PGVGGNLQDHLQLRLIYKLENARTLNQIAGTLWGKMGMGLRYLYDRSGPLSMAPSQLGAF 347

Query: 332 SKSIPNAPAGDM--HVAIIGRTAW----HAIGQRMGTMLIWVNKSYSRGTVKLRSADPLE 385
           ++S P   + ++  HV  +    +    HA      T  +   +  SRG + +RSA+P +
Sbjct: 348 ARSGPEQTSANLEYHVQPLSLERFGEPLHAF--PAFTASVCDLRPQSRGRIDIRSANPAD 405

Query: 386 EPVVDFRLLSDPRDLARLKEGFGVAARALGDANLDGVRGPVFPTSYSERVRKVSAPGAWN 445
            P++    LS P DL    +   +  R +    L   +    P  Y         PG   
Sbjct: 406 APLIRPNYLSHPEDLRVAADAIRLTRRIVAAPALSQFK----PVEY--------LPG--- 450

Query: 446 AFQMGALSFILDWAGPLRGAIVHGLITLGVRIDDLLNDDAKLTEFIGNGVAGVWHASGTC 505
                                            D L  + +L E        ++H  GTC
Sbjct: 451 ---------------------------------DSLQSEEQLHEAAARIGTTIFHPVGTC 477

Query: 506 KMGAGDDPTAVTDGAGRVYGVEGLRVCDSSIMPSIPRANTNMPTLMLTERIADLI 560
           +MG+  D  AV D   RV+GV GLR+ D+S+MP I   NT  PTLM+ E+ A LI
Sbjct: 478 RMGS--DKDAVVDAQLRVHGVPGLRIADASVMPRITSGNTCSPTLMIAEKAAQLI 530