Pairwise Alignments

Query, 571 a.a., Oxidoreductase, GMC family from Variovorax sp. SCN45

Subject, 550 a.a., choline dehydrogenase from Pseudomonas putida KT2440

 Score =  166 bits (421), Expect = 2e-45
 Identities = 176/593 (29%), Positives = 241/593 (40%), Gaps = 109/593 (18%)

Query: 6   DYLILGGGTAGCALAARLSEDAGKRVVLVEAGRDLRPDAMSDSIRSRYPGL----AYL-- 59
           DY+++G G AGC LA RLS D   RV+L+EAG            R  YP +     YL  
Sbjct: 11  DYVVVGAGPAGCLLANRLSADPSCRVLLLEAGG-----------RDNYPWIHIPVGYLYC 59

Query: 60  --DKQNIWTALVATVSGAPTRQPNRTPRGYEQGRVLGGGSAINAMVANRGAPDDYDEWAR 117
             + +  W        G   R       GY +G+VLGG S+IN M+  RG   DYD WA 
Sbjct: 60  IGNPRTDWCFKTEAQPGLGGRA-----LGYPRGKVLGGCSSINGMIYMRGQAADYDHWAA 114

Query: 118 LGAEGWSGEVALKYFRKLERDCDFDDAYHGRGGPVPVRRLAPERVS-PFVQAVCRSLRMR 176
            G +GW+ +  L  F+  E        +HG  G   V R   +R S P + A   +    
Sbjct: 115 QGNDGWAWKDVLPLFKASENHFAGASEHHGAEGEWRVER---QRYSWPILDAFRDAAEQS 171

Query: 177 GHPQYPDQNGEWKDGVFPAAIATSDDGQRVPASIVYLTPEVRARKNLRIVTDTHVQRLLF 236
           G  +  D N     G     +     G R  AS  +L P ++ R NL ++T   V ++L 
Sbjct: 172 GIGKVDDFNTGDNQGCGYFQV-NQRSGVRWNASKAFLRP-IKDRANLTVLTGVQVDQVLL 229

Query: 237 EGARVTGAEA---GGQPMHAA--HTIVCMGGIHSAALLMRSGIGPAADLRALGIEVKADR 291
           +  R    +A   G     AA    I+C G + S  +L RSGIGP   L +LGI V+ D 
Sbjct: 230 DNTRARAVKALWQGAWHEFAARREIILCAGAVGSPGILQRSGIGPRQLLESLGIGVRHDM 289

Query: 292 PGVGMNLMEHPLTAVSTYLPPASRMKDLAEHHDQAL---LRYT-SKSIPNAPAGDMHVAI 347
           PGVG NL +H    +   +     +  +A      +   LRY   +S P A A     A 
Sbjct: 290 PGVGGNLQDHLQLRLIYQIRNTRTLNQMANSLWGKMGMGLRYLYDRSGPLAMAPSQLGAF 349

Query: 348 IGRTAWHAIG-----------QRMG---------TMLIWVNKSYSRGTVKLRSADPLEEP 387
           +  +   A             +R G         T  +   +  SRG + + S D    P
Sbjct: 350 VRSSPEQATANLQYHVQPLSLERFGEPLHQFPAFTASVCNLRPASRGRIDICSTDMNSTP 409

Query: 388 VVDFRLLSDPRDLARLKEGFGVAARALGDANLDGVRGPVFPTSYSERVRKVSAPGAWNAF 447
            +D   LS P+DL        VAA A+                     R++    A  AF
Sbjct: 410 RIDPNYLSAPQDLR-------VAADAI------------------RLTRRIVQAPALAAF 444

Query: 448 QMGALSFILDWAGPLRGAIVHGLITLGVRIDDLLNDDAKLTEFIGNGVAGVWHASGTCKM 507
           +           GP                   L  +  L E  G     ++H  GTC+M
Sbjct: 445 EPKEY-----LPGP------------------ALQSEEDLFEAAGKIGTTIFHPVGTCRM 481

Query: 508 GAGDDPTAVTDGAGRVYGVEGLRVCDSSIMPSIPRANTNMPTLMLTERIADLI 560
           G G     V D   RV+G+ GLRV D+SIMP I   NT  PTLM+ E+ A LI
Sbjct: 482 GNG--AMDVVDNQLRVHGIPGLRVADASIMPQITSGNTCSPTLMIAEKAAQLI 532