Pairwise Alignments

Query, 475 a.a., probable integral membrane protein NMA1898 from Variovorax sp. SCN45

Subject, 456 a.a., conserved protein of unknown function from Pseudomonas putida KT2440

 Score =  362 bits (930), Expect = e-104
 Identities = 212/462 (45%), Positives = 277/462 (59%), Gaps = 13/462 (2%)

Query: 9   QPVRIAVVGHTNAGKTSLLRTLTRRVDFGEVSQRPGTTRHVESVDLEVEDETAVRFFDTP 68
           +P+++AVVGHTN GKTSLLRTLTR V FGEVS RP TTRHVE   L V+ E  +  +DTP
Sbjct: 5   EPLKLAVVGHTNVGKTSLLRTLTRDVGFGEVSHRPSTTRHVEGARLSVDGEPLLELYDTP 64

Query: 69  GLEDAVALREHLARFD---PQATPPERIRQFLQGPEAHGVFEQEAKVLRTMLDIDAAFLV 125
           GLEDA+AL ++L R +    +   P R+ +FLQG EA   FEQEAKVLR +L   A   V
Sbjct: 65  GLEDAIALLDYLERLERPGERLDGPARLERFLQGSEARQRFEQEAKVLRQLLASHAGLYV 124

Query: 126 IDVREPVLPKFRDEIELLNACARPVLPVLNFVRDAASREPAWKELLSAYGLHVQVRFDAA 185
           ID REPVL K+RDE+E+L  C +P+LPVLNFV  +  REP W+E L+  GLH  VRFD+ 
Sbjct: 125 IDAREPVLAKYRDELEVLANCGKPLLPVLNFVASSQHREPEWREALARLGLHALVRFDSV 184

Query: 186 APFVGAEQDLYNDLATLLRDRRELLRGVVDSLETEAAGRRRSACTRIAALLVDAASVRRT 245
           AP    E+ LY  LA LL + R  L+ ++D  + +   RR S    IA LL+D A+ RR+
Sbjct: 185 APPEDGERRLYESLALLLENARPALQRLIDDQQAQRLARRHSGKRLIAELLLDCAACRRS 244

Query: 246 VQAAEFADAGRRQTLVAALRKTVFDKAQHCTDDLLALYGFRQGDADEAPLPIIEGRWTLD 305
           V+A   A+A      + ALR+ +  + Q C + LL LY FR+ DA  + LP+++GRW  D
Sbjct: 245 VEAEPAAEA----RAIEALRQDIRQREQRCVEALLKLYAFRREDAHASDLPLLDGRWGDD 300

Query: 306 FFSPEAMKDAGLRLGKGAVIGAAVGVVADLAVAGISLGAGAALGGAIGGAVSQGWGPLGR 365
            F+PE +K  G+RLG G   GAA G   DL V G++LGA AAL GAI G   Q     G 
Sbjct: 301 LFNPETLKLLGVRLGSGVAAGAAAGAGVDLLVGGLTLGA-AALAGAIAGGALQTARNYGS 359

Query: 366 KLANKLRDVHELTVEDGVLFALVAWQLKLTQALEVRGHAATQRIAAEAPADGDAPTRAAA 425
           +L  KL+   ELTV+D VL  L   Q +L  AL+ RGHAA   I      + D       
Sbjct: 360 RLMGKLKGKRELTVDDTVLRLLALRQQQLMVALDNRGHAAQDSIRL---GELDEKAWREG 416

Query: 426 AAVRAAQPARNHPEWEASGVTTRAFWRPSPQREALVAELSEL 467
               A   AR HP+W  S +   A    + ++E L A +S++
Sbjct: 417 KLPEALVKARAHPQW--STLNPGAKLNQAERQEQLEALVSQI 456