Pairwise Alignments

Query, 331 a.a., BUG/TctC family periplasmic protein from Variovorax sp. SCN45

Subject, 321 a.a., ABC transporter, substrate-binding protein (cluster 7, di-/tri-carboxylate) from Variovorax sp. SCN45

 Score =  195 bits (496), Expect = 1e-54
 Identities = 111/312 (35%), Positives = 178/312 (57%), Gaps = 4/312 (1%)

Query: 22  LPLAAQAQPAAGAYPSKPVHITVANTPGSSPDVLARFLGQRLSEQWKQPVVIDNRAGAAG 81
           L LAA A  +A  +PSKP+   V   P  S D++AR +G+ L     QPVV+DN+ GA+G
Sbjct: 12  LVLAASAA-SADTWPSKPITFVVPTAPAGSTDIMARLVGEPLQRALGQPVVVDNKPGASG 70

Query: 82  ILAADGLAKAQPDGYSLLVGADGPITILPNIQAGLPYDARRDLVPVVSLGQIDFVLVANP 141
            + A+ +A+A PDGY+LL+   G     P++   L +   +D VPV  + +   V+  + 
Sbjct: 71  NIGAEFVARAAPDGYTLLMQYSGYHVGNPSLYPNLKWSPTKDFVPVAMVMRAPHVVAVSG 130

Query: 142 KTGFRTVADFVRAAKAHPGRINYASAGNGSPQQLSMELLKQKAGIYVTHIPYRGGPLGMQ 201
           K   +++ + +   K   G + YAS+GNGS Q ++ ELL +++   +TH+PY+G    + 
Sbjct: 131 KLPVKSMKELIEYGKKKEGGLFYASSGNGSIQHIAGELLSRQSKQAMTHVPYKGSGPAIN 190

Query: 202 DVIAGQVDVMFIAVGPA-LPQIRSGRLVALGTSGEKRHALLPEVPTVGET-YAGYRSGTW 259
           D+IAG VD MFI   P+ +    +GR+ AL  +G KRH  +P+VPT  E    GY   +W
Sbjct: 191 DLIAGNVD-MFITTPPSVIGHFATGRIKALAYTGSKRHPSMPDVPTSAEAGLPGYEVESW 249

Query: 260 FGLFAPARTPQPVIDAIAADAGRIVQTPAARAELAAQGIEATGHAQRQFQAQVSSEYERY 319
           F +FAPA+TP  V+  ++A+  +IV++ A R ++  QG  AT          V  E   +
Sbjct: 250 FAVFAPAKTPPEVVARLSAEIKKIVESEAFRKKVDEQGAFATYMDSPTLAKFVDQELATW 309

Query: 320 AQIVKAVGIKAE 331
           ++++K+  IK +
Sbjct: 310 SKVIKSADIKPD 321