Pairwise Alignments

Query, 398 a.a., FIG00854755: hypothetical protein from Variovorax sp. SCN45

Subject, 329 a.a., putative Outer membrane protein from Pseudomonas putida KT2440

 Score = 55.1 bits (131), Expect = 3e-12
 Identities = 56/245 (22%), Positives = 101/245 (41%), Gaps = 38/245 (15%)

Query: 121 DNRLFVIDLTTTPPRLLDTLRIGKQPSGLSINRAGNLALVANRADNSVSVLRIAGKKVTL 180
           DN L +IDL T    + +TL +G++P GL ++    L  +     + V V+ +A +K+  
Sbjct: 39  DNSLSLIDLQTL--EVTETLPVGQRPRGLLLSHDSKLLYICASDSDRVQVMDVATRKI-- 94

Query: 181 IDTVAMGDSVAHVRFTPDGRRALAAKFPSHKIALIDVDGEKVSYNKLDLAAGLWPYNVDV 240
           I  +  G         P+ R    +      + +ID   +KV      +  G+ P  + V
Sbjct: 95  IKELPSGKDPEQFALHPNDRWLYVSNEDDALVTVIDTVTDKVLGQ---IEVGIEPEGMAV 151

Query: 241 TPDGKLALTADNGNAGASDGQVDTVSVID-MEAAPPRVVDKVVVGDGPEGLAVSPTGRHA 299
           +PDGK A+              +T +++  ++ +   + D  +V   P  +  S  G   
Sbjct: 152 SPDGKWAVNTS-----------ETTNMLHWIDTSTQTLADSTLVDQRPRFVEFSKDGSRL 200

Query: 300 VAVILRGSNAAKNAYFYNRNGSVVLLKIDGKKVTRANEVVVRGL------PEGAVWSADG 353
            A    G             G+V +L +  ++V +     ++G+      P G   SADG
Sbjct: 201 WASAEIG-------------GTVTILDVTTRQVLKTLNFQIKGVHPDKVQPVGIKLSADG 247

Query: 354 KYLYV 358
           KY +V
Sbjct: 248 KYAFV 252



 Score = 50.8 bits (120), Expect = 6e-11
 Identities = 59/233 (25%), Positives = 106/233 (45%), Gaps = 32/233 (13%)

Query: 158 ALVANRADNSVSVLRIAGKKVTLIDTVAMGDSVAHVRFTPDGRRALAAKFPSHKIALIDV 217
           A V+N  DNS+S++ +   +VT  +T+ +G     +  + D +        S ++ ++DV
Sbjct: 32  AWVSNEKDNSLSLIDLQTLEVT--ETLPVGQRPRGLLLSHDSKLLYICASDSDRVQVMDV 89

Query: 218 DGEKVSYNKLDLAAGLWPYNVDVTPDGKLALTADNGNAGASDGQVDTVSVIDMEAAPPRV 277
              K+     +L +G  P    + P+ +    ++  +A         V+VID      +V
Sbjct: 90  ATRKIIK---ELPSGKDPEQFALHPNDRWLYVSNEDDA--------LVTVID--TVTDKV 136

Query: 278 VDKVVVGDGPEGLAVSPTGRHAVAVILRGSNAAKNAYFYNRNGSVVLLKIDGKKVTRANE 337
           + ++ VG  PEG+AVSP G+ AV       N ++         + +L  ID    T A+ 
Sbjct: 137 LGQIEVGIEPEGMAVSPDGKWAV-------NTSET--------TNMLHWIDTSTQTLADS 181

Query: 338 VVVRGLPEGAVWSADGKYLYVGNFIDKDITILRLDGDTLVPTGKSFVLEG-HP 389
            +V   P    +S DG  L+    I   +TIL +    ++ T  +F ++G HP
Sbjct: 182 TLVDQRPRFVEFSKDGSRLWASAEIGGTVTILDVTTRQVLKT-LNFQIKGVHP 233



 Score = 43.9 bits (102), Expect = 7e-09
 Identities = 32/98 (32%), Positives = 49/98 (50%), Gaps = 5/98 (5%)

Query: 145 QPSGLSINRAGNLALVANRADNSVSVLRIAGKKVTLIDTVAMGDSVAHVRFTPDGRRALA 204
           QP G+ ++  G  A VA    N V+V  I  K   ++D + +G  V  + FTPD  + LA
Sbjct: 237 QPVGIKLSADGKYAFVALGPANHVAV--IDAKTFDVLDYLLVGRRVWQLAFTPDQSQLLA 294

Query: 205 AKFPSHKIALIDVDGEKVSYNKLDLAAGLWPYNVDVTP 242
               S  +++ID    KV  +   +  G +P+ V VTP
Sbjct: 295 TNGVSGDVSVIDAKQLKVLKS---VKVGRYPWGVVVTP 329