Pairwise Alignments

Query, 618 a.a., Efflux ABC transporter, permease/ATP-binding protein Atu2242 from Variovorax sp. SCN45

Subject, 610 a.a., multidrug ABC transporter ATP-binding protein from Pseudomonas simiae WCS417

 Score =  588 bits (1516), Expect = e-172
 Identities = 300/608 (49%), Positives = 417/608 (68%), Gaps = 2/608 (0%)

Query: 1   LFRFFEKLLHPYPAAEPSLPPQGFFAFLWACTHGVRGKIAAMAVLTAVMSIFEAALFAIL 60
           L+R FE+L+  +  A  + PP     F       V    AA+ V+  + ++ E ALF+ L
Sbjct: 2   LYRRFEQLIDIFRDAPSAAPPDKVLPFYLYYLRQVWPHFAALLVVGLIGALIEVALFSYL 61

Query: 61  GRIVDWLGGQVPSRLWEDRGTTLMWLAAFLVISIGVV-ALQTIVKHQTLAVNLPMRLRWN 119
            RI+D   G  P+  ++   T L+W+A   ++   +  AL  ++ HQT++  +   +RW 
Sbjct: 62  SRIIDLAQGTPPADFFQVHSTELIWMAVVALLLRPIFGALHDLLVHQTISPGMTSLIRWQ 121

Query: 120 FHRLMLGQSMAFYQDEFAGRITAKVMQTALAVRETIFVLADVLVAMGVYVATMIILVGVL 179
            H  +L QS+ F+Q++FAGRI  ++MQT  ++R++     D +  + +Y  + ++L    
Sbjct: 122 NHSYVLKQSLNFFQNDFAGRIAQRIMQTGNSLRDSAVAAVDAIWHVAIYAISSLVLFAEA 181

Query: 180 DAQLVWPFLIWLVLYVVSLIYFVPRLGKVGKAQADARALMTGRVTDAYTNIATVKLFSHT 239
           D +L+ P + W++ Y ++L YFVPR+ +     ++AR+ + GR+ D YTNI T+KLF+HT
Sbjct: 182 DWRLMIPLVTWIICYGLALRYFVPRVKERSVISSEARSKLMGRIVDGYTNITTLKLFAHT 241

Query: 240 QREAGFARDAMREFMHTGYGQMRLVSAFEIVNHTLSMGLTAGMAGMALWLWSNGAVGVGA 299
           + E  +A++A+ E         R+V++ +IV  T++  L     G+ALWLW+   + VGA
Sbjct: 242 RYEQEYAKEAIIEQTEKTQLASRVVTSMDIVITTMNGLLIVTTTGLALWLWTQSLISVGA 301

Query: 300 VAAATAMALRLQGMSHWIMWEMTSLFENIGTVQDGMKTLSRPRTVLDAADATVLQVPQGE 359
           +A AT + +R+  MS WIMW +  +FENIG VQDG+KT+++P  V+D  +A  L VP GE
Sbjct: 302 IALATGLVIRIVNMSGWIMWVVNGIFENIGQVQDGLKTIAQPLAVIDRDNAPRLSVPHGE 361

Query: 360 VRFEHASFRYGDGGRRVIDDLNLTVKPGEKIGLVGRSGAGKSTLVNLLLRFHDLESGRIL 419
           VRFE   F YG     +I  LNL +K GEKIGL+G SGAGKSTLVNLLLR +DL+ GRIL
Sbjct: 362 VRFEQVDFHYGKKSG-IIGGLNLEIKAGEKIGLIGPSGAGKSTLVNLLLRLYDLQGGRIL 420

Query: 420 IDGQDIAHVTQDSLRSHIGMVTQDTSLMHRSVADNVAYGRPDATREQIEAAARRAEAHDF 479
           IDGQ+IA V Q+SLR  IGM+TQDTSL+HRS+ DN+ YG+PDAT E++ AA  +A A +F
Sbjct: 421 IDGQNIADVAQESLREQIGMITQDTSLLHRSIRDNLLYGKPDATDEELWAAVHKARADEF 480

Query: 480 IQTLGDAGGRRGYEAHVGERGVKLSGGQRQRVAIARVMLKDAPILLLDEATSALDSEVEA 539
           I  L D+ GR G +AHVGERGVKLSGGQRQR+AIARV+LKDAPIL++DEATSALDSEVEA
Sbjct: 481 IPLLSDSEGRTGLDAHVGERGVKLSGGQRQRIAIARVLLKDAPILIMDEATSALDSEVEA 540

Query: 540 AIQQSLYTLMEGKTVIAIAHRLSTIAAMDRLIVLDEGRVVEEGDHRTLMAQGGLYARLWA 599
           AIQ+SL TLM+GKTVIAIAHRLSTIA MDRL+VL++G++ E G H  L+A GGLYARLW 
Sbjct: 541 AIQESLETLMQGKTVIAIAHRLSTIARMDRLVVLEKGQIAESGSHAELLAHGGLYARLWQ 600

Query: 600 HQSGGFLG 607
           HQ+GGF+G
Sbjct: 601 HQTGGFVG 608