Pairwise Alignments

Query, 409 a.a., ABC transporter, substrate-binding protein (cluster 4, leucine/isoleucine/valine/benzoate) from Variovorax sp. SCN45

Subject, 366 a.a., Leu/Ile/Val-binding protein from Xanthobacter sp. DMC5

 Score =  132 bits (333), Expect = 1e-35
 Identities = 97/339 (28%), Positives = 162/339 (47%), Gaps = 20/339 (5%)

Query: 5   FKLLALTSALAFSMGALAADPIKIGVDGPFTGGSSSMGVSMRDGVRLAAEEINKSGGVLG 64
           F  LA+ + L  +  A A   +K+G  GP TG  ++ G  M+ GV  A  +IN +GG+ G
Sbjct: 6   FAALAVCAGLVLAPAAHA--DVKLGAAGPLTGSIAAFGTQMKTGVEQAVNDINAAGGING 63

Query: 65  RQIQLIERDDEAKNERGVQIAQEFVNKEKVVAAVGYINTGVALASQRFFQDAKIPVLNNV 124
           ++I L+  DD  K E+GV  A + +  +     +G++N+G+++A+   + +A +  ++  
Sbjct: 64  QKIVLLVADDGGKPEQGVAAANKLIT-DGATFVIGHVNSGISIAASSDYAEAGVLQISPA 122

Query: 125 ATGSVITHQFDKDPENYVFRNAAHDSIQAPMIVEEAITRRGYK--KVAILADSTNYGQLG 182
           +T    T +   +     FR A  D  Q P  V  A     +K  K+AI+ D + YG+  
Sbjct: 123 STNPAYTERKLWN----TFRTAGRDDQQGP--VAGAFLAEKFKDGKIAIVHDKSPYGKGL 176

Query: 183 REDLERALKNKGITPVAVEKFNIKDVDMTAQLLKSKEAGAEAVLTYGIGPELAQIANGMT 242
            ++ ++AL   G+  V  E  N  + D +A + K K AG + +   G+ PE   I   M 
Sbjct: 177 ADETQKALNKAGVKEVMYEGINPGEKDYSALVSKMKAAGVDVIYFGGLHPEAGLIVRQMR 236

Query: 243 KLGWKVPIIGSWTLAMANFIDNAGPGGDGARMPQTFIQEP-TNPKRKAFIDAFVGKFKPK 301
             G K  ++G   LA   + + AG GG G  M  TF  +P  NP  K  ++A   K    
Sbjct: 237 DQGLKTVLMGGDALADKEYWNIAGTGGTGTLM--TFGPDPRKNPAAKGIVEAMTAK---- 290

Query: 302 NNRMDSPVSAAQGYDSIYLLAAAIKQAGSTDGPKIKAAL 340
              +D+       Y  + ++  A + A S D  K+ A +
Sbjct: 291 --GIDAEGYVLYSYAGVQVIKQAAEAAKSLDPKKVAAQI 327