Pairwise Alignments

Query, 409 a.a., ABC transporter, substrate-binding protein (cluster 4, leucine/isoleucine/valine/benzoate) from Variovorax sp. SCN45

Subject, 379 a.a., Urea ABC transporter, substrate-binding protein UrtA from Variovorax sp. SCN45

 Score =  159 bits (402), Expect = 1e-43
 Identities = 120/379 (31%), Positives = 187/379 (49%), Gaps = 18/379 (4%)

Query: 8   LALTSALAFSMGAL-AADPIKIGVDGPFTGGSSSMGVSMRDGVRLAAEEINKSGGVLGRQ 66
           L L S LA ++  + AADPIKIG     TG ++ +G      ++    EINKSGGVLGR 
Sbjct: 6   LLLASLLALAIHPVYAADPIKIGAVISRTGPAAFLGEPQEITLKHYVGEINKSGGVLGRP 65

Query: 67  IQLIERDDEAKNERGVQIAQEFVNKEKVVAAVGYINTGVALASQRFFQDAKIPVLNNVAT 126
           ++L+  DD +        A   + ++KVVAA+G   TG  LA    F +AK+P+++  A 
Sbjct: 66  LELVIYDDTSDANTTRTFATRLIEEDKVVAAMGASTTGGTLAIAPVFDEAKVPLISLAAG 125

Query: 127 GSVITHQFDKDPENYVFRNAAHDSIQAPMIVEEAITRRGYKKVAILADSTNYGQLGREDL 186
             ++     +    +VF+   HD       +   +  RGYK +A++  +   G+  R++ 
Sbjct: 126 IEIV-----QPVRPFVFK-TPHDDRMVCSAIALDMKARGYKNIALMTGTDGVGKSMRKEC 179

Query: 187 ERALKNKGITPVAVEKFNIKDVDMTAQLLKSKEA-GAEAVLTYGIGPELAQIANGMTKLG 245
             A   +GI  +A E FN KD+DMT QL K K   G +AV   G G  LA +     +LG
Sbjct: 180 TAAAAAQGIKVIADENFNAKDIDMTPQLTKIKNTKGVDAVFVGGFGQPLAVVTRNYGQLG 239

Query: 246 WKVPIIGSWTLAMANFIDNAGPGGDGARMPQTFI-----QEPTNPKRKAFIDAFVGKFKP 300
              P   +   A   +I  AGP  +  R+P   +       P +P R   + A+   +K 
Sbjct: 240 LPFPQYHANGSASKEYIQMAGPASERVRLPGPLLVVADKLGPNDPARAVPV-AYAATYK- 297

Query: 301 KNNRMDSPVSAAQGYDSIYLLAAAIKQAGSTDGPKIKAALEDLQAPVEGVVTTYNKPFTK 360
           K +  D+       YD++ L+  AIK+AGS++   I+ ALE  +  + GV  TYN   + 
Sbjct: 298 KVSGKDASSFGGYSYDALMLIVNAIKRAGSSNPAAIRNALETTKNYM-GVTGTYN--LSP 354

Query: 361 TDHDAITANIPVFGEVKGG 379
           TDH+ +  +     ++K G
Sbjct: 355 TDHNGLDRSSLYMVDIKNG 373