Pairwise Alignments

Query, 409 a.a., ABC transporter, substrate-binding protein (cluster 4, leucine/isoleucine/valine/benzoate) from Variovorax sp. SCN45

Subject, 405 a.a., ABC-type branched-chain amino acid transport systems, periplasmic component from Variovorax sp. SCN45

 Score =  108 bits (271), Expect = 2e-28
 Identities = 93/317 (29%), Positives = 147/317 (46%), Gaps = 18/317 (5%)

Query: 26  IKIGVDGPFTGGSSSMGVSMRDGVRLAAEEINKSGGVLG---RQIQLIERDDEAKNERGV 82
           +KIG   P +G  + +G     G ++A E++N  G  +G    + +L+  DD    ++G 
Sbjct: 53  VKIGHVAPTSGPIAHLGKDNEMGAKMAIEDLNAKGIKIGDKTAKFELVAEDDAGDPKQGT 112

Query: 83  QIAQEFVNKEKVVAAVGYINTGVALASQRFFQDAKIPVLNNVATGSVITHQFDKDPENYV 142
            +AQ+ V+ EKV   VG++N+G  + + + + DA IP ++  AT    T Q  K      
Sbjct: 113 AVAQKLVD-EKVNGVVGHLNSGTTIPASKLYSDAGIPQISPSATNPKYTRQGFKT----T 167

Query: 143 FRNAAHDSIQAPMIVEEAITRRGYKKVAILADSTNYGQLGREDLERALKNKGITPVAVEK 202
           FR  A D+     + + A+     K +A++ D T YGQ   E+ E++ K  G T V  E 
Sbjct: 168 FRVVADDTQLGGTLGKYAVETLKGKNIAVIDDRTAYGQGVAEEFEKSAKAAGATIVGHEF 227

Query: 203 FNIKDVDMTAQLLKSKEAGAEAVLTYGI----GPELAQIANGMTKLGWKVPIIGSWTLAM 258
              K  D  A L K K A  + +   G+    GP L Q+     +LG  V  +G   L  
Sbjct: 228 TTDKSTDFNAILTKLKSAKPDVLFFGGMDAVGGPMLKQV----KQLGLNVKFMGGDGLCT 283

Query: 259 ANFIDNAGPGGDGARMPQTFIQEPTNPKRKAFIDAFVGKFKPKNNRMDSPVSAAQGYDSI 318
                 AG    G  M         +   K  ++ F  KFK KN  ++  + A   YD++
Sbjct: 284 GELPKLAG-DAIGEDMVVCAEAGGVDGDFKQPLEDFKAKFKTKNG-VEVQIYAPYVYDAV 341

Query: 319 YLLAAAIKQAGSTDGPK 335
            +LA A+ +AGS+D  K
Sbjct: 342 NVLAEAMVKAGSSDPEK 358