Pairwise Alignments

Query, 328 a.a., ABC transporter, permease protein 1 (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

Subject, 336 a.a., dipeptide ABC transporter - putative membrane subunit from Pseudomonas putida KT2440

 Score =  228 bits (580), Expect = 2e-64
 Identities = 126/334 (37%), Positives = 190/334 (56%), Gaps = 14/334 (4%)

Query: 6   LLRHAASRLLQALGLVLAVVVLNFVLVHAAPGDPVETIAGASGGMSPELMAQLRTQYGLD 65
           +L   A RL   +     + +L F L+   PGDPVE + G    + PE+ AQ   + GL+
Sbjct: 1   MLSFIARRLGLLIPTFFGITLLTFALIRLIPGDPVEVMMGERR-VDPEMHAQAMERLGLN 59

Query: 66  KSLPVQLAVYLGKVAQGDLGYSYFFNLPVTQMIGERLPATLLLVLSSVLLAFFAGTALGV 125
           K LPVQ   Y+GK+AQGDLG S      V +      PATL L  +++L A   G   GV
Sbjct: 60  KPLPVQYLDYVGKLAQGDLGESLRTRESVWREFLTLFPATLELAFAALLFAGVVGLLAGV 119

Query: 126 LSSRKPNGWLSQFITVLSLVGFAAPVFWLGIMLVILLAS-------------VFPILPVA 172
           +++ K        +  +SL G++ P+FW G++L++  +              ++ I P  
Sbjct: 120 IAALKRGSLFDHGVMGISLAGYSMPIFWWGLILIMFFSVSLGWTPVSGRIDLLYDIEPKT 179

Query: 173 GMRSIDSTGAGGFADMLDVAQHLVLPTLTLSLVYLAQYSRLARSSMLDVLGSDFIRTARA 232
           G   ID+  +       D   HL+LP + L  + LA  +R+ RSSML+VL  D+IRTARA
Sbjct: 180 GFMLIDTLLSDEEGAFKDAVMHLILPAIVLGTIPLAVIARMTRSSMLEVLREDYIRTARA 239

Query: 233 KGLADRVVLYKHALRNALLPVVTVLGLQFGNVLAGAILVETVFNWPGLGRLAFESVLRRD 292
           KGL+   V++ H LRNAL+PV+TV GLQ G +LAGA+L ET+F+WPG+G+   E++  RD
Sbjct: 240 KGLSPARVVFVHGLRNALIPVLTVFGLQVGTLLAGAVLTETIFSWPGIGKWLIEAIGARD 299

Query: 293 YPTILGVLLFSSIVVVVMNQLTDLCYRFIDPRIK 326
           YP +   +L  + +V+++N + D+ Y   +PRI+
Sbjct: 300 YPVVQNGILLIACLVILVNFVVDILYGLANPRIR 333