Pairwise Alignments

Query, 328 a.a., ABC transporter, permease protein 1 (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

Subject, 323 a.a., ABC transporter permease from Dickeya dianthicola ME23

 Score =  228 bits (581), Expect = 2e-64
 Identities = 122/315 (38%), Positives = 192/315 (60%), Gaps = 7/315 (2%)

Query: 13  RLLQALGLVLAVVVLNFVLVHAAPGDPVETIAGASGGMSPELMAQLRTQYGLDKSLPVQL 72
           R  Q L ++  + +++F+LV  APGDPV+  A  +  MS + + ++R   GLD+ L +Q 
Sbjct: 8   RFGQLLPMLFFISLVSFLLVKLAPGDPVQ--AYITPRMSLDDIKRVRHSLGLDQPLAMQY 65

Query: 73  AVYLGKVAQGDLGYSYFFNLPVTQMIGERLPATLLLVLSSVLLAFFAGTALGVLSSRKPN 132
            ++L  V QGDLGYS   + PV  +I ERLPATL L+ +S+LLA      LG+L+    +
Sbjct: 66  LLWLKNVLQGDLGYSLISHRPVLTLIVERLPATLGLMGASLLLAVAIAMPLGLLAGAFRH 125

Query: 133 GWLSQFITVLSLVGFAAPVFWLGIMLVILLASVFPILPVAGMRSIDSTGAGGFADMLDVA 192
            WL   + +++ +G + P+FW GI+L+I+ +     LP  GMR++     G     LDV 
Sbjct: 126 RWLDHLLNLVAYIGISVPIFWFGILLIIIFSVQLNWLPSMGMRTV-----GAADSWLDVV 180

Query: 193 QHLVLPTLTLSLVYLAQYSRLARSSMLDVLGSDFIRTARAKGLADRVVLYKHALRNALLP 252
           +H VLP + L+   L+ Y R  RS  +  L +D+++T  A G     +L++H L+N +LP
Sbjct: 181 RHGVLPCVALTFYNLSHYVRYIRSHTITQLSADYVQTQLAYGATRAHILFRHVLKNVMLP 240

Query: 253 VVTVLGLQFGNVLAGAILVETVFNWPGLGRLAFESVLRRDYPTILGVLLFSSIVVVVMNQ 312
           V+T+ GL F  ++ GA + E+VF+WPG+G L  +S+   DYP I+ +++ S+ ++VV N 
Sbjct: 241 VITLFGLSFSELVVGAYVTESVFSWPGMGLLGLQSITSLDYPLIMAMVMLSACMLVVGNL 300

Query: 313 LTDLCYRFIDPRIKA 327
           L D+ YR  DPRIKA
Sbjct: 301 LADVLYRVADPRIKA 315