Pairwise Alignments

Query, 537 a.a., ABC transporter, substrate-binding protein (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

Subject, 533 a.a., peptide ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

 Score =  107 bits (268), Expect = 9e-28
 Identities = 104/445 (23%), Positives = 190/445 (42%), Gaps = 49/445 (11%)

Query: 87  QPYLAESWKLADDGKSLTLKLRKDALFHDG------KPVTSADVAFSI-----------L 129
           +P LA SW ++ DG + T  LR    FH        +   + DV F+             
Sbjct: 72  EPGLATSWDISQDGLTYTFHLRDGVKFHTTDFFSPTRDFNADDVLFTFNRLLDAQSPFRQ 131

Query: 130 AIKANHPFTTMMG---PVEKVDTPDAYTAVVRMSVPHPAIVLAMSPALCPILPKHI---- 182
           A  +  P+ T MG    ++ VD  D +T    ++    + V  ++ +   +         
Sbjct: 132 AYPSESPYFTDMGLNTTIKSVDKLDDHTVRFNLNNVDASFVQNLAMSFASVQSAEYAAQL 191

Query: 183 --YGDGQDLKNHPRNTTDVIGSGPYRVTDFKPAQRVVLERFDKFFIPGRPYLDKIIINIT 240
              G  +++   P      +G+GP+    ++   ++      +++ P    LD ++  IT
Sbjct: 192 LKQGKAEEINQKP------VGTGPFVFKRYQKDSQIRYVANKQYWKPEDVKLDNLVFAIT 245

Query: 241 PDSASLMLGLERGDIQMVPFATLPTDLKRLANDPKMSLTPKGYDGIGALNWLAFNTAKKP 300
           PD+AS +  L+ G+ Q+  +   P D++ +  DP + +  +    +G   +LA+N    P
Sbjct: 246 PDAASRLQKLKAGECQVSGYPR-PADIEVMKQDPNLHVLQQAGFNLG---FLAYNVTHPP 301

Query: 301 LSDVQVRKAIATAIDKNFITKALMGGFATVSDGPLVASSPFAVPDLVRYPLDLKKAGEML 360
           L  ++VR+A+  AIDK  I KA+      ++   L  +     P +   P D  KA  +L
Sbjct: 302 LDQLKVRQALDMAIDKPAIIKAVYQSAGQLAQNALPPAQWSYDPTIKDAPYDPTKAKALL 361

Query: 361 DAAGYKAGAGGERFKLTIDYLPGVDDQQKNVAEYIRGQLKKVGITVEVRASADFPAWAKR 420
             AG   G     + +T+      + +    A+ I+   +KVGI   +  S ++  + KR
Sbjct: 362 KEAGVAPGTTVNLWAMTVQRASNPNARMS--AQMIQQDWEKVGIKANI-VSYEWGEYIKR 418

Query: 421 LASHDFDMSMDTVFNW----GDPIIGVHRTYLSTNIKPIVWTNTQSYANPKVDELLNTAG 476
             + + D     ++ W    GDP   +   Y    +K    +N   + NP  D+L+  A 
Sbjct: 419 AKNGEHDA---MIYGWTGDNGDPDNWLGVLYSCAAVK---GSNYAKWCNPAYDKLVQQAK 472

Query: 477 GLIDATQRKAYYATFQKIVTDELPI 501
              D  QR  +Y   QKI+ +++PI
Sbjct: 473 VSNDREQRIKWYQQAQKILKEQVPI 497