Pairwise Alignments

Query, 537 a.a., ABC transporter, substrate-binding protein (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

Subject, 543 a.a., oligopeptide ABC transporter substrate-binding protein from Agrobacterium fabrum C58

 Score =  257 bits (657), Expect = 7e-73
 Identities = 174/529 (32%), Positives = 263/529 (49%), Gaps = 13/529 (2%)

Query: 8   LPVFSRRATLLSASFAAAGTLLPLSVFAAAEPKRGGTLVIGSTQTPRHLNGAVQSGIATA 67
           + +  R+  LLSA+ A A  L  +   A   PK+GG + +     P  L     S   T 
Sbjct: 15  MDITRRKTLLLSAALAGAMLLPSMPALATETPKKGGIVTLAGLGEPTTLVPLSDSNTRTR 74

Query: 68  MPSTQIFASPLRFDDKWNPQPYLAESWKLADDGKSLTLKLRKDALFHDGKPVTSADVAFS 127
             ST+I    +RFD ++ P P LAESW+ + DG   T KLRK   +HDGK  T+ DV FS
Sbjct: 75  AISTKILEGLVRFDSEFKPHPVLAESWETSADGLRYTFKLRKGVKWHDGKDFTAQDVKFS 134

Query: 128 ILAIKANHPFTTM-MGPVEKVDTPDAYTAVVRMSVPHPAIVLAMSPALCPILPKHIYGDG 186
           +LA K   P   +    +  ++TP+  TAVV +S P P ++ A++    PILP H Y   
Sbjct: 135 LLAFKKVGPRGRITFANLADIETPNPLTAVVVLSKPAPYLLRALTGGETPILPAHAY--A 192

Query: 187 QDLKNHPRNTTDVIGSGPYRVTDFKPAQRVVLERFDKFFIPGRPYLDKIIINITPDSASL 246
            +  N   N    +G+GP+   ++K    V L++   ++    PYLD  +     D+AS 
Sbjct: 193 SENYNESPNGNAPVGTGPFVFEEWKRGSYVKLKKNPDYWQADLPYLDGFVARFVADAAST 252

Query: 247 MLGLERGDIQMVPFATLPTDLKRLANDPKMSLTPKGYDGIGALNWLAFNTAKKPLSDVQV 306
            + +E G+       +  +DL+RL  +PK+++       +       FN     L+  +V
Sbjct: 253 TISVETGEADYTADVSY-SDLERLRQNPKLAVEVYTDAYLNNAAIFEFNLENAILAKKEV 311

Query: 307 RKAIATAIDKNFITKALMGGFATVSDGPLVA-SSPFAVPDLVRYPLDLKKAGEMLDAAGY 365
           R A+A AID+NFI  A+  G A  +   + A  S +       YP DL KA E+LD AGY
Sbjct: 312 RHALAHAIDRNFINDAIFFGTAKPAGSNIPAVFSTYNDEKPFTYPFDLAKANELLDKAGY 371

Query: 366 KAGAGGERFKLTIDYLPGVDDQQKNVAEYIRGQLKKVGITVEVRASADFPAWAKRL-ASH 424
             GA G RF L + +LP   D  +  +EY+R    K+G+ V++    D   + KR+    
Sbjct: 372 PKGADGTRFSLRLAFLP--SDVFRKTSEYLRSSFGKLGVKVDI-VEGDLATFIKRVYTER 428

Query: 425 DFDMSMDTVFNWGDPIIGVHRTYLSTNIK-PIVWTNTQSYANPKVDELLNTAGGLIDATQ 483
            FD++++ +    DP  GV R Y S  IK P  + N   Y NP VD+L   A   +D T+
Sbjct: 429 GFDLTVNGISRLFDPTAGVQRLYWSDGIKNPAPYVNAAHYNNPTVDDLFRAAAIEVDETK 488

Query: 484 RKAYYATFQKIVTDELPIEFINQVPYHTVSSKKVANVPTTI---WGPLS 529
           R   +   QK+V D+LP   I  +P   + +  + ++ TTI   +G LS
Sbjct: 489 RAGQFHEIQKVVGDDLPNFSIVALPTVILRNTSLKSLVTTIDIAYGDLS 537