Pairwise Alignments

Query, 291 a.a., ABC transporter, permease protein 1 (cluster 4, leucine/isoleucine/valine/benzoate) from Variovorax sp. SCN45

Subject, 298 a.a., High-affinity branched-chain amino acid transport system permease protein LivH from Xanthobacter sp. DMC5

 Score =  161 bits (408), Expect = 1e-44
 Identities = 96/286 (33%), Positives = 160/286 (55%), Gaps = 7/286 (2%)

Query: 6   QLIFSGIALGMIYAVIAFGYQLTFATSDTLNFGQGNALMLGAMVGLTLVNMGLNYWLMIP 65
           QL+ SGIA+G IY + A G  +T   +  LNFGQG+ LM+GA   + ++  G+   L + 
Sbjct: 8   QLLVSGIAMGAIYTLTAKGLFITHLATHRLNFGQGDFLMVGAFASIGMLTAGVPAPLAVL 67

Query: 66  LVCLFGAFQGAVVERIAVRPAIKIKSEFG---WIMSTIALGIIFTNVAENVWGRDDLKFP 122
            V +     G ++ER A+RP  ++    G   W+++T    +I  N+ E  +G+     P
Sbjct: 68  GVLVLMGVLGYLLERFAIRPLDRLGDRAGAYSWVLTTAGAALILQNIVELGFGKSAQYAP 127

Query: 123 ---SPLPESPLHFLGANVLPMEILVVIGALLMMLAVELFNRRSIYGKAVVATFNDRDAAK 179
              S   ++ +  LG  +   E  ++I A +++ A   F   S +GKAV A   + +AA 
Sbjct: 128 PLFSKTRDNVISILGVGIFFEEAAIIITAFIVVGAFYWFLFGSRWGKAVYAVAFNPEAAS 187

Query: 180 LMGINTGLVITFSYALSSMTAAFAGVLIAPLTLTGASMGAVLGLKAFAVAIIGGLTSGMG 239
           L GI+   V+   + L+++ A  +GVL+ PL      MG +  +KA AVA +GG T+ +G
Sbjct: 188 LFGIDVRGVVVLVFVLAALMAGISGVLVGPLVSVHPHMGLIFTIKALAVAAVGGFTNPVG 247

Query: 240 IVVGGIILGIAETTTGFYLSTGYKDVPGLVLLLIVLAVRPSGLFGK 285
           I++GG++ G+AE  +  Y  + + D+  L+ ++ +LAVRPSGLFG+
Sbjct: 248 ILLGGLLFGVAEAFSN-YWDSAFGDLYPLLFVMALLAVRPSGLFGE 292