Pairwise Alignments

Query, 291 a.a., ABC transporter, permease protein 1 (cluster 4, leucine/isoleucine/valine/benzoate) from Variovorax sp. SCN45

Subject, 290 a.a., High-affinity branched-chain amino acid transport system permease protein LivH (TC 3.A.1.4.1) from Variovorax sp. SCN45

 Score =  181 bits (458), Expect = 2e-50
 Identities = 100/285 (35%), Positives = 162/285 (56%), Gaps = 1/285 (0%)

Query: 6   QLIFSGIALGMIYAVIAFGYQLTFATSDTLNFGQGNALMLGAMVGLTLVNMGLNYWLMIP 65
           Q   +GI++G+IY  IA G+ + + +S  +NF QG  +MLGAM  + L+  GL Y L   
Sbjct: 6   QFALAGISVGVIYGAIAVGFNIIYNSSHVVNFAQGEFVMLGAMTCVLLLGAGLPYPLAAF 65

Query: 66  LVCLFGAFQGAVVERIAVRPAIKIKSEFGWIMSTIALGIIFTNVAENVWGRDDLKFPSPL 125
           L     A  G ++  +A+RPA K       I+ TI   I+   +A  ++G      P+ +
Sbjct: 66  LAVAATAVVGLLLYDVAIRPA-KNAPVIMLIIITIGASILIRGLARPIFGTGVASLPAVV 124

Query: 126 PESPLHFLGANVLPMEILVVIGALLMMLAVELFNRRSIYGKAVVATFNDRDAAKLMGINT 185
           P + +   GA V P  ++VV G L  +L + LF R+++ GK ++A  +D  AA LMGI  
Sbjct: 125 PGASISIGGAVVQPQSLIVVAGTLGAVLLLWLFMRKTLLGKGLIAASSDPMAATLMGIRV 184

Query: 186 GLVITFSYALSSMTAAFAGVLIAPLTLTGASMGAVLGLKAFAVAIIGGLTSGMGIVVGGI 245
             ++  S+ +S+   A +G+LIAP+ L    MG +L LK FA AI+GG+ S  G V+GG+
Sbjct: 185 SNIVRLSFLISASLGAVSGILIAPIALANYEMGTLLALKGFAAAILGGMGSIPGAVLGGL 244

Query: 246 ILGIAETTTGFYLSTGYKDVPGLVLLLIVLAVRPSGLFGKAAIKK 290
           ++G++E  +  Y+S+ YKD    V++++ L   P+GL G   + +
Sbjct: 245 LVGLSEAMSAGYISSDYKDATAFVVIMLALFFFPNGLVGSGEVTR 289