Pairwise Alignments

Query, 291 a.a., ABC transporter, permease protein 1 (cluster 4, leucine/isoleucine/valine/benzoate) from Variovorax sp. SCN45

Subject, 307 a.a., branched chain amino acid transporter - permease subunit from Pseudomonas putida KT2440

 Score =  133 bits (334), Expect = 6e-36
 Identities = 91/300 (30%), Positives = 148/300 (49%), Gaps = 15/300 (5%)

Query: 6   QLIFSGIALGMIYAVIAFGYQLTFATSDTLNFGQGNALMLGAMVGLT----LVNMGLNYW 61
           Q + +G+ +G  YA+IA GY + +     +NF  G   M+G+ V       L  MG++  
Sbjct: 9   QQLVNGLTIGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVAFIALAGLAMMGIHSL 68

Query: 62  LMIPLVCLFGAF-----QGAVVERIAVRPAIKIKSEFGWIMSTIALGIIFTNVAENVWGR 116
            ++  V            G  +ER+A RP ++  +    ++S I + I   N        
Sbjct: 69  PILMTVAFVATIFVTSAYGYSIERVAYRP-LRNSNRLIPLISAIGMSIFLQNTVLLSQDS 127

Query: 117 DDLKFPSPLPESPLHFLGAN----VLPMEILVVIGALLMMLAVELFNRRSIYGKAVVATF 172
            D   P+ +P S     G      +  M+ILV +  L+ M  + LF  RS  G+A  A  
Sbjct: 128 KDKSIPNLIPGSFSFGPGGAEEVLISYMQILVFVVTLVAMTLLTLFISRSRLGRACRACA 187

Query: 173 NDRDAAKLMGINTGLVITFSYALSSMTAAFAGVLIA-PLTLTGASMGAVLGLKAFAVAII 231
            D   A L+GINT  +I  ++ + +  AA A VL++    +   + G ++GLKAF  A++
Sbjct: 188 EDIKMANLLGINTNNIIALTFVIGAALAAVAAVLLSMQYGVINPNAGFLVGLKAFTAAVL 247

Query: 232 GGLTSGMGIVVGGIILGIAETTTGFYLSTGYKDVPGLVLLLIVLAVRPSGLFGKAAIKKV 291
           GG+ S  G ++GG++LG+AE          YKDV    LL++VL  RP+G+ G+  ++KV
Sbjct: 248 GGIGSIPGAMLGGLVLGVAEAFGADIFGDQYKDVVAFGLLVLVLLFRPTGILGRPEVEKV 307