Pairwise Alignments

Query, 291 a.a., ABC transporter, permease protein 1 (cluster 4, leucine/isoleucine/valine/benzoate) from Variovorax sp. SCN45

Subject, 291 a.a., branched-chain amino acid ABC transporter permease from Magnetospirillum magneticum AMB-1

 Score =  192 bits (488), Expect = 7e-54
 Identities = 103/287 (35%), Positives = 165/287 (57%), Gaps = 3/287 (1%)

Query: 6   QLIFSGIALGMIYAVIAFGYQLTFATSDTLNFGQGNALMLGAMVGLTLVNMGLNYWLMIP 65
           Q +FSG+  G IYA+   G+ + +  S  +NF QG  +M+G M   T+V  G+  +L IP
Sbjct: 7   QYLFSGLTSGAIYALAGLGFAIIYNASHVINFAQGEFIMIGGMATATMVAAGVPIYLAIP 66

Query: 66  LVCLFGAFQGAVVERIAVRPAIKIKSEFGWIMSTIALGIIFTNVAENVWGRDDLKFPSPL 125
           L        G  +E+ A+ PA +       I+ TI   I     A+ +W ++    P+  
Sbjct: 67  LAMAASMLVGVAMEKFAIEPA-RNADVVTIIIITIGASIFMRGAAQLIWDKEFHSLPAFS 125

Query: 126 PESPLHFLGANVLPMEILVV-IGALLMMLAVELFNRRSIYGKAVVATFNDRDAAKLMGIN 184
            E+P+  +GA ++P  + V  I A+ + L    FNR +++GKA++ T ++R AA+L+G+ 
Sbjct: 126 GETPIAVMGATLMPQSLWVFGISAVAIALLWYFFNR-TMFGKAMLGTSHNRLAAQLVGVA 184

Query: 185 TGLVITFSYALSSMTAAFAGVLIAPLTLTGASMGAVLGLKAFAVAIIGGLTSGMGIVVGG 244
              V+  S+ALS++  A  G+++ P+T T    G +LGLK F+ A++GGL +G G ++GG
Sbjct: 185 VKRVLLASFALSALLGAVGGIVVTPITFTNYEAGIMLGLKGFSAAVLGGLGNGTGAIIGG 244

Query: 245 IILGIAETTTGFYLSTGYKDVPGLVLLLIVLAVRPSGLFGKAAIKKV 291
           +I+GIAE     YLS+ YKD    +++L VL   PSGLFGK    +V
Sbjct: 245 LIVGIAEAMASGYLSSAYKDAIAFIIILFVLFFMPSGLFGKRGTDRV 291