Pairwise Alignments

Query, 291 a.a., ABC transporter, permease protein 1 (cluster 4, leucine/isoleucine/valine/benzoate) from Variovorax sp. SCN45

Subject, 308 a.a., high-affinity branched-chain amino acid ABC transporter permease LivH from Dickeya dianthicola ME23

 Score =  159 bits (401), Expect = 1e-43
 Identities = 104/302 (34%), Positives = 160/302 (52%), Gaps = 19/302 (6%)

Query: 6   QLIFSGIALGMIYAVIAFGYQLTFATSDTLNFGQGNALMLGAMVGL----TLVNMGLNY- 60
           Q +F+G+ LG  YA+IA GY + +     +NF  G   M+G+ V       L+ MG++  
Sbjct: 10  QQMFNGVTLGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVSFIVIAALMMMGIDAG 69

Query: 61  WLMIPLVCL----FGAFQGAVVERIAVRPAIKIKSEFGWIMSTIALGIIFTNVAENVWGR 116
           WL+I    +      +  G  +ER+A +P    K     ++S I + I   N      G 
Sbjct: 70  WLLIGAAFIAAVVISSAYGWSIERVAYKPVRNSKRLIA-LISAIGMSIFLQNYVSLTQGS 128

Query: 117 DDLKFPS------PLPESPLHFLGANVLPMEILVVIGALLMMLAVELFNRRSIYGKAVVA 170
            D+  PS       L ES  +   A +  M++ + I   L MLA+ LF R S  G+A  A
Sbjct: 129 RDVALPSLIHGQWVLGES--NGFAATLSSMQLTIWIVTFLAMLALTLFIRYSRMGRACRA 186

Query: 171 TFNDRDAAKLMGINTGLVITFSYALSSMTAAFAGVLIAPLT-LTGASMGAVLGLKAFAVA 229
              D   A L+GI+T  VI+ ++ + ++ AA AGVL+     +    +G + G+KAF  A
Sbjct: 187 CAEDLKMASLLGISTDRVISLTFVIGAVMAAVAGVLLGQFYGVINPYIGFMAGMKAFTAA 246

Query: 230 IIGGLTSGMGIVVGGIILGIAETTTGFYLSTGYKDVPGLVLLLIVLAVRPSGLFGKAAIK 289
           ++GG+ S  G ++GG++LGIAE  T  YLST YKDV    LL++VL V P+G+ G+  ++
Sbjct: 247 VLGGIGSIPGAMIGGLVLGIAEALTSAYLSTEYKDVVSFALLIVVLLVMPTGILGRPEVE 306

Query: 290 KV 291
           KV
Sbjct: 307 KV 308