Pairwise Alignments

Query, 703 a.a., Flagellar biosynthesis protein FlhA from Variovorax sp. SCN45

Subject, 709 a.a., flagellar export pore protein from Pseudomonas putida KT2440

 Score =  470 bits (1209), Expect = e-136
 Identities = 268/687 (39%), Positives = 415/687 (60%), Gaps = 22/687 (3%)

Query: 13  DIALVLLVLGVLVVLFAPIPSGLLDFLILTNFSFAFLVLLLTFYMARPVEFSTFPSLLLI 72
           ++ + LL+L +L ++  PIP  LLD     N + + +VLL+  Y  RP++F+ FP++LL+
Sbjct: 21  NLGVPLLLLVMLAMMMLPIPPFLLDVFFTFNIALSIVVLLVCVYALRPLDFAAFPTILLV 80

Query: 73  ATLFRLSLNVAATRLILSDGD-----AGRVIGAIGAFVVGGNYVIGLIVFLILIVVQYVV 127
           ATL RL+LNVA+TR+++  G      AG+VI A G  V+GGNYV+G +VF IL+++ +VV
Sbjct: 81  ATLLRLALNVASTRVVMLHGQEGHGAAGKVIQAFGEVVIGGNYVVGAVVFAILMIINFVV 140

Query: 128 VTSGAQRVSEVAARFTLDSMPGQQMSIDADLNMGFIDQAEAQRRRKNIEKEAGFYGAMDG 187
           VT GA R+SEV+ARFTLD+MPG+QM+IDADLN G IDQA+A+ RR  + +EA FYG+MDG
Sbjct: 141 VTKGAGRISEVSARFTLDAMPGKQMAIDADLNAGLIDQAQAKHRRAEVAQEAEFYGSMDG 200

Query: 188 ASKFVKGDAIAGIIILLINIIGGLVIGVMQHGLPWGQALQTYTLLTIGDGIVTQVPALVI 247
           ASKFV+GDAIAG++IL IN+IGG++IG++QH + + +A + Y LLTIGDG+V Q+P+L++
Sbjct: 201 ASKFVRGDAIAGLLILFINLIGGMLIGMLQHNMSFSEAGKVYALLTIGDGLVAQLPSLLL 260

Query: 248 AVGTGIIVTRSSSDTNLSREALRQVSSFPKTLLMVALALGGLLVLPGIPAIPTL---VLT 304
           +    I+VTR+S   ++ +   RQ+   PK L +    +  + ++PG+P I  L   ++ 
Sbjct: 261 STAAAIMVTRASGSEDMGKLINRQMFDSPKALAVSGALMIVMGLVPGMPHIAFLSLGLMA 320

Query: 305 AGFLLAATLLYRAAKVKSDNAAQGMGDPIDPENLAAADGTAAAAASDDPYTLLQVEPVEV 364
           AG         + AKVK+   AQ   D +     A           DD   +  ++ + +
Sbjct: 321 AGGAYLVWKKQQQAKVKAQQEAQRQQDLLPSPQRAL---ETKELGWDD---VTPIDMIGL 374

Query: 365 HLGGNWGPVINQ-PGSVFMERIASFRKQHANEFGLVLPRVRFKDSSRLSADRYEIHLDGV 423
            +G    P++++  G   + RI   RK+ + + G ++P V  +D+  L    Y + L GV
Sbjct: 375 EVGYRLIPLVDRNQGGQLLARIKGVRKKLSQDLGFLMPTVHIRDNLDLQPSAYRLTLMGV 434

Query: 424 LVGKGEARADRLLAIHPSGDTKSIPGEPTRDPTYGLPALWIEERQREAAAQAKFTLVDAP 483
           ++ + E   DR LAI+P     ++ G   RDP +GL A+WI+  QR  A    +T+VDA 
Sbjct: 435 ILAEAEIYPDRELAINPGQVFGTLNGIAARDPAFGLEAVWIDVGQRSQAQSLGYTVVDAS 494

Query: 484 TVFMTHLTEMLRRESATLLTRSEVDRLLSRVRKSQPGLVEELIPTVLSASDVQKVLQNLL 543
           TV  THL ++L++    L+   EV +LL  + K+ P L EEL+P V+S S + KVLQ LL
Sbjct: 495 TVVATHLNQILQKHCHELIGHEEVQQLLQVLAKASPKLAEELVPGVISLSGLLKVLQALL 554

Query: 544 REKVSIRHVEAILETLADAGRATRDTAQLTEIVRQRLGHAICQGLIGEASALQVLTLDPA 603
            E+V +R + +I E +A+    ++DTA L   VR  L  AI Q ++G  S L V+TL+P 
Sbjct: 555 SEQVPVRDIRSIAEAIANNAGKSQDTAALVAAVRVGLCRAIVQSIVGVESELPVITLEPR 614

Query: 604 IESQFLQSMQIAVGEAGATTAAGTQPFVIDPRLSEQLIKRLVQQAERMMKSNLLPVLLCA 663
           +E   L S+Q     AG     G    +++P ++E+L + L++ A+R        +LL A
Sbjct: 615 LEQILLNSLQ----RAGQGQEDGV---LLEPSMAEKLQRSLIEAAQRQEMQGQPAILLVA 667

Query: 664 PELRRHVRGLSERVMPHLRVLSMAEVP 690
             +R  +       +P+L VL+  E+P
Sbjct: 668 GPIRAMLSRFGRLAVPNLHVLAYQEIP 694