Pairwise Alignments

Query, 305 a.a., Cytochrome c oxidase (cbb3-type) subunit CcoP (EC 1.9.3.1) from Variovorax sp. SCN45

Subject, 313 a.a., cytochrome c oxidase subunit, cbb3-type from Pseudomonas putida KT2440

 Score =  246 bits (627), Expect = 6e-70
 Identities = 131/309 (42%), Positives = 193/309 (62%), Gaps = 13/309 (4%)

Query: 5   ISRFWSNYVAVISLLSILGCVILLWLTARKRVAPSADNTTGHVWDGDLREANNPLPMWWV 64
           ++ FWS Y++V+++ S++G   LL  T + +   + D T GH +DG + E +NPLP WW 
Sbjct: 1   MTTFWSTYISVLTIGSLIGLTWLLLATRKGQSNNTTDETMGHSFDG-IEEYDNPLPKWWF 59

Query: 65  GLFVLTIVFGLGYLAVFPGLGSFRG-----QSDWTSRGEYEAEVAKATQELAPVYAKYTA 119
            LFV T+ F +GYL ++PGLG+++G     ++ WT   E++ E+ KA     P++AKY A
Sbjct: 60  WLFVGTLAFSVGYLILYPGLGNWKGILPGYENGWTGANEWQKEMDKADARFGPIFAKYAA 119

Query: 120 MPVEEIARDPQAHAIGERLFMGNCAQCHGSDARGSKGFPDLTDKDWLYGGTPERITESIT 179
           MPVEE+A+DPQA  +G RLF  NC+ CHGSDA+G+ GFP+LTD DW +GG PE I  SI 
Sbjct: 120 MPVEEVAKDPQALKMGSRLFASNCSVCHGSDAKGAFGFPNLTDNDWRWGGDPETIKTSIM 179

Query: 180 KGRVGVMPPMAAAVGTSDDVKNVANYVLS-LSGEP-HDSVRAGL--GKSKFTV-CVACHG 234
            GR GVMP  A  +G    V +VA +V+S L G    +  +A +  G+  F   CVACHG
Sbjct: 180 SGRHGVMPAWAEVIG-DQGVADVAAFVVSKLDGRTLPEGAKADVENGQKIFAANCVACHG 238

Query: 235 VGGVGNQTLGAPNLS-DKIWLHGYGEAAIIQMINSGKRNEMPAQERRLTEAQIRMVASYV 293
             G G   +GAPNL+  + +++G   A + Q I  G++ +MPAQ       ++ ++A+YV
Sbjct: 239 PEGKGTPAMGAPNLTHPQAFIYGSSFAQLQQTIRYGRQGQMPAQAEIQGNDKVHLLAAYV 298

Query: 294 WGLSNSTAA 302
           + LS   +A
Sbjct: 299 YSLSQDGSA 307