Pairwise Alignments

Query, 499 a.a., Efflux transport system, outer membrane factor (OMF) lipoprotein from Variovorax sp. SCN45

Subject, 593 a.a., efflux transporter outer membrane subunit from Rhodanobacter sp000427505 FW510-R12

 Score =  342 bits (878), Expect = 2e-98
 Identities = 207/506 (40%), Positives = 283/506 (55%), Gaps = 21/506 (4%)

Query: 7   PGWRWLAAVLALAGTGLSAGCMVGPDFVRPAPAQVDSYTRGALPATTEAGD---GRSQRF 63
           P WR LAAV+ L   GL AGC VGPDF RPA   V   T   LP TT   D   G+ QRF
Sbjct: 79  PLWRLLAAVVVL---GL-AGCAVGPDFQRPAAPAVGRLTAAPLPTTTAGADVAGGQPQRF 134

Query: 64  GPAAELPADWWRLFGSPALDEAVRQALQHNPTLQSAEASLRQSQDELRAGHGIFYPQLDA 123
              A++PA WW LF S  L+  + Q+L HN  L++A+A+L  + +  RA  G +YP ++A
Sbjct: 135 VLDADIPAQWWTLFHSAELNALIEQSLAHNSDLKAAQAALAVAHENARAQRGAYYPAVNA 194

Query: 124 SFGATRARTAPVLQGSSAAGTIYQVV---------TLSGAISYPLDVFGGERRTVEGLAA 174
            F ATR + +  +    A G  Y VV         T   +ISY  D+FG  RRTVE L A
Sbjct: 195 GFSATRQKQSQQV----APGPNYPVVPQEYLYSFFTPQLSISYAPDLFGLNRRTVESLQA 250

Query: 175 QAENQRFVAMAAYLALEANLVQTCVARAAYVAQRRTTEELIALERDQLHSIEAQVHAGTV 234
           Q ++ RF  +AA + L  N+V   V +A+   Q   + ELIA++   +  +  Q+  G  
Sbjct: 251 QEQSVRFQMIAARITLSTNVVAAAVQQASLREQIAASRELIAIDSKMVDILRYQLAKGYA 310

Query: 235 PYANQLSQLSLIASNRAQLAALAQKISQADHLLAALQGDTPAEAALPDVDIGELTLPRDL 294
              +  +Q S +A  +A L  L  ++ Q + LLA L G  P+ A  P  D+  L LP+ L
Sbjct: 311 GRLDLAAQESQLAQLQATLPPLLTRLDQQNDLLAVLAGRLPSGAPAPAFDLASLHLPQQL 370

Query: 295 PLSLPSELVRQRPDILAAEAQLHAASAAIGVATAAMFPSFSLSAGYGAASPQLASLLAGG 354
           PLSLPS LV QRPD+  AEA +HAASA IGVA A   P+ SL+A  G+ +  +  +   G
Sbjct: 371 PLSLPSRLVAQRPDVRQAEANMHAASANIGVAIANRLPNVSLTANAGSTAVAIGQVFKSG 430

Query: 355 SRYWSLAPAVALPLLHGGTLRARRQAAIDAHAAREADYRQTVLSAFEQVADALRALEHDA 414
           + +W +   +A P+ HGG+L  + +AA  A+      YR TVL+AF+ VAD L AL+HDA
Sbjct: 431 TGFWGIGADIAAPIFHGGSLLHQERAAKAAYVQASEQYRSTVLTAFQNVADTLAALQHDA 490

Query: 415 QALQAQAEARSSAADALALQQAGYRAGLVAYVDLQNADIQFHAASLSYLSALAQRHQDTV 474
           + LQA + A  +A   L L Q  Y+ G   Y+ L  A+  +  A ++ + A A R+ DT 
Sbjct: 491 EGLQAASSAAQAAKLTLDLSQRQYKDGYAGYLSLLGAEQGYQQARIALVQAQASRYADTA 550

Query: 475 ALFAALGGGWWNAPSSG-AGARAGQP 499
           ALF ALGGGWWNA     A + A QP
Sbjct: 551 ALFQALGGGWWNAADGAQAHSAATQP 576