Pairwise Alignments

Query, 499 a.a., Efflux transport system, outer membrane factor (OMF) lipoprotein from Variovorax sp. SCN45

Subject, 468 a.a., Outer membrane protein OprJ from Pseudomonas putida KT2440

 Score =  184 bits (467), Expect = 6e-51
 Identities = 146/484 (30%), Positives = 211/484 (43%), Gaps = 24/484 (4%)

Query: 10  RWLAAVLALAGTGLSAGCMVGPDFVRPAPAQVDSYTRGALPATTEAGDGRSQRFGPAAEL 69
           R L  VLAL      AGC + P + RP             P   E GD          +L
Sbjct: 7   RVLPIVLALT----LAGCSLTPTYQRPEA-----------PVAAEWGDAAGHTGHSVEQL 51

Query: 70  PADWWRLFGSPALDEAVRQALQHNPTLQSAEASLRQSQDELRAGHGIFYPQLDASFGATR 129
             DW      P L + V  AL +N +L+     + Q++ + R       P L+AS    R
Sbjct: 52  --DWQAFIVDPVLRQLVGTALDNNRSLRQTLLDIEQARAQYRIQRADRVPGLNASASGNR 109

Query: 130 ARTAPVLQ--GSSAAGTIYQVVTLSGAISYPLDVFGGERRTVEGLAAQAENQRFVAMAAY 187
                 L   G     + YQV        Y +D+FG  +   +    Q      V  AA 
Sbjct: 110 QHLPAALSSDGREGVSSTYQVGL--SLPEYEVDLFGRVKSLSDAALEQYLATEEVGRAAR 167

Query: 188 LALEANLVQTCVARAAYVAQRRTTEELIALERDQLHSIEAQVHAGTVPYANQLSQLSLIA 247
           +AL A + Q  +A      ++  T + +A   D L  +  +  AGT    +    L L+ 
Sbjct: 168 IALIAEVSQAYLALDGAERRQALTRQTLASREDSLALVGQRRAAGTATALDHQEALGLVE 227

Query: 248 SNRAQLAALAQKISQADHLLAALQGDTPAEAALPDVDIGELTLPRDLPLSLPSELVRQRP 307
            +RA+L    ++  QA + L  L G   A  A+P     E  +  D+    PS L+ +RP
Sbjct: 228 QSRAELEVTVRQQRQAYNALVLLLGSAEAAKAMPAERPDEPMVLNDIVPGAPSALIERRP 287

Query: 308 DILAAEAQLHAASAAIGVATAAMFPSFSLSAGYGAASPQLASLLAGGSRYWSLAPAVALP 367
           DILAAE +L A +A IG A AA FP  SL+  +G AS Q++ L  GGSR W+  P ++LP
Sbjct: 288 DILAAEHRLRARNADIGAARAAFFPRISLTGSFGTASAQMSGLFDGGSRSWAFMPQLSLP 347

Query: 368 LLHGGTLRARRQAAIDAHAAREADYRQTVLSAFEQVADALRALEHDAQALQAQAEARSSA 427
           L   G  RA    A     +  A Y   +  AF +VADAL A +   +   A+     ++
Sbjct: 348 LFDAGRNRAGLSLAEARKDSAVAAYEGAIQVAFREVADALAATDTLRREQAARRALADTS 407

Query: 428 ADALALQQAGYRAGLVAYVDLQNADIQFHAASLSYLSALAQRHQDTVALFAALGGGWWNA 487
            + L L +A Y  G+  ++   +A    +    +++ A  QR    V LF ALGGGW   
Sbjct: 408 RETLTLAKARYEGGVDNHLRYLDAQRNSYVNEAAFIEASTQRQLALVNLFRALGGGW--- 464

Query: 488 PSSG 491
           PS G
Sbjct: 465 PSKG 468