Pairwise Alignments

Query, 499 a.a., Efflux transport system, outer membrane factor (OMF) lipoprotein from Variovorax sp. SCN45

Subject, 484 a.a., Probable efflux pump outer membrane protein TtgC from Pseudomonas putida KT2440

 Score =  169 bits (427), Expect = 3e-46
 Identities = 124/475 (26%), Positives = 216/475 (45%), Gaps = 14/475 (2%)

Query: 14  AVLALAGTG-LSAGCMVGPDFVRPAPAQVDSYTRGALPATTEAGDGRSQRFGPAAELPAD 72
           ++L+LA T  +  GC + PD+  P       + +G   + T++ D  +   G        
Sbjct: 4   SLLSLAVTAFILGGCSLIPDYQTPEAPVAAQWPQGPAYSPTQSADVAAAEQG-------- 55

Query: 73  WWRLFGSPALDEAVRQALQHNPTLQSAEASLRQSQDELRAGHGIFYPQLDASFGATRART 132
           W + F  PAL + ++ +L +N  L+ A  +L   + + R      +P + A+   +R R 
Sbjct: 56  WRQFFHDPALQQLIQTSLVNNRDLRVAALNLDAYRAQYRIQRADLFPAVSATGSGSRQRV 115

Query: 133 APVLQGSSAAGTIYQVVTLSGAISYPLDVFGGERRTVEGLAAQAENQRFVAMAAYLALEA 192
              +  +  +G   Q     G  +Y LD+FG  R   E       +      +  +AL A
Sbjct: 116 PANMSQTGESGITSQYSATLGVSAYELDLFGRVRSLTEQALETYLSSEQARRSTQIALVA 175

Query: 193 NLVQTCVARAAYVAQRRTTEELIALERDQLHSIEAQVHAGTVPYANQLSQLSLIASNRAQ 252
           ++        A  A  + TEE +    +  +        G     +     + +   R +
Sbjct: 176 SVANAYYTWQADQALFKLTEETLKTYEESYNLTRRSNEVGVASALDVSQARTAVEGARVK 235

Query: 253 LAALAQKISQADHLLAALQGD-TPAEAALP-DVDIGELTLPRDLPLSLPSELVRQRPDIL 310
            +   + ++Q  + L  L G   PA+ A P ++D  +L    ++P  LPS+++++RPDI 
Sbjct: 236 YSQYQRLVAQDVNSLTVLLGTGIPADLAKPLELDADQLA---EVPAGLPSDILQRRPDIQ 292

Query: 311 AAEAQLHAASAAIGVATAAMFPSFSLSAGYGAASPQLASLLAGGSRYWSLAPAVALPLLH 370
            AE  L AA+A IG A AA FPS SL+A  G+ SP +  L +GG   W   P + LP+ +
Sbjct: 293 EAEHLLKAANANIGAARAAFFPSISLTANAGSLSPDMGHLFSGGQGTWLFQPQINLPIFN 352

Query: 371 GGTLRARRQAAIDAHAAREADYRQTVLSAFEQVADALRALEHDAQALQAQAEARSSAADA 430
            G+L+A    +        A Y +T+ +AF++V+D L A +   + LQAQ +   +  D 
Sbjct: 353 AGSLKASLDYSKIQKDINVAKYEKTIQTAFQEVSDGLAARKTFEEQLQAQRDLVQANQDY 412

Query: 431 LALQQAGYRAGLVAYVDLQNADIQFHAASLSYLSALAQRHQDTVALFAALGGGWW 485
             L +  YR G+ + +   +A     +A  + +     +    V L+ ALGGGW+
Sbjct: 413 YRLAERRYRIGIDSNLTFLDAQRNLFSAQQALIGDRLSQLTSEVNLYKALGGGWY 467