Pairwise Alignments

Query, 375 a.a., porin, Gram-negative type from Variovorax sp. SCN45

Subject, 339 a.a., Outer membrane porin protein 32 precursor from Variovorax sp. SCN45

 Score =  210 bits (535), Expect = 4e-59
 Identities = 142/381 (37%), Positives = 200/381 (52%), Gaps = 57/381 (14%)

Query: 5   LMCSALGLAGAGAAHAQSSVTMFGVMDLGIQYTKGDGNGSVKALSNGG-LSTSRIGFRGT 63
           L+ +A  L   G A AQS++++FG +DL +   K  G  SV A+  GG +  SR+GFRGT
Sbjct: 6   LLIAAGCLGLHGHALAQSTISIFGTVDLNVTSAKS-GMTSVTAMDQGGNIFPSRLGFRGT 64

Query: 64  EDLGGGLRAGFWLEGSLNPDLGTGRPSNSNNQTSGAGTAGPITFDRMSFVSISSDTLGEL 123
           EDLGGGL AGFWLE +  PD G         +  G      + + R S +S+S +  GEL
Sbjct: 65  EDLGGGLAAGFWLESASLPDTG---------EMQG------VAWQRRSTLSLSHNAFGEL 109

Query: 124 RLGHDFIPTHYNSIYFDPFNANGVARAGNLTFA-TVGTGPLPTTITGSNTVSYWLPPKLG 182
           RLG D+ P+ +N   F PF   GV  + N+      G G   T +  +N+VSY+LP  LG
Sbjct: 110 RLGRDYTPSFWNISQFSPFGTVGVGGSSNIVEGWPFGLGGAKTLVRANNSVSYFLPRNLG 169

Query: 183 GLYGMAMVGTGENDSTALNRDDGNFAGARLGFASGAFDIAAAITRSHFNSTATIG-NYTH 241
           G+YG   V   E  +         ++G RLG+ASGA DIAA+     +  T   G +Y +
Sbjct: 170 GVYGQFTVAMPEGQAGT------KYSGLRLGYASGALDIAAS-----YGQTPVEGLHYRN 218

Query: 242 ANIGASWDAGFAKFFALY------NTVRVNIVAGTVRKNTAEIGAHIPAFEVGRIRISYA 295
           A++G S+D G AK +A Y      N  + NI+ G     +  +GA +    V R      
Sbjct: 219 ASLGGSYDFGLAKLYANYLQQKAPNDKQTNIMLGL----SVPVGAGVIKASVAR------ 268

Query: 296 YLDDRSDDSVRNADGMPRNRDDARQFGIGYVHNLSKRTALYGTYARLMNSGQARYVVSGG 355
                      N  G   + DDA Q  +GYVH LSKR+A+YGT++++ N G A YVV+  
Sbjct: 269 ----------SNRSGPGVDADDATQLAVGYVHWLSKRSAIYGTWSKIRNKGNAAYVVTDA 318

Query: 356 VA-PAAGQRSTGWEFGVRHLF 375
           +  P AG  S G++ G+ H F
Sbjct: 319 LKDPQAGASSRGFQIGISHNF 339