Pairwise Alignments

Query, 375 a.a., porin, Gram-negative type from Variovorax sp. SCN45

Subject, 354 a.a., no description from Variovorax sp. SCN45

 Score =  125 bits (315), Expect = 1e-33
 Identities = 112/383 (29%), Positives = 170/383 (44%), Gaps = 37/383 (9%)

Query: 1   MKRFLMCSALGLAGAGAAHAQSSVTMFGVMDLGIQYTKGDGNGSVKALSNGGLSTSRIGF 60
           MK+ +    +  A +    AQSSVT++G +DL + + K  G  S K L +GG + SR+GF
Sbjct: 1   MKKTVAAGLVLAAYSSLTPAQSSVTIYGTVDLYMAFAKS-GITSSKRLEDGGQTASRLGF 59

Query: 61  RGTEDLGGGLRAGFWLEGSLNPDLGTGRPSNSNNQTSGAGTAGP-ITFDRMSFVSISSDT 119
           RGTEDLGGGL A F LE    PD G G               GP ++F R SFV +S   
Sbjct: 60  RGTEDLGGGLSAHFTLESGFAPDTGNGT------------LPGPAMSFSRQSFVGLSG-P 106

Query: 120 LGELRLGHDFIPTHYNSIYFDPFNANGVARAGNLTFAT-VGTGPLPTTITGSNTVSYWLP 178
            G++  G  + P  Y     DP+  N V    NL  AT    G  P     SN + Y  P
Sbjct: 107 WGQIDAGRMYTPMFYTLFKADPYGVNSVFSPINLVAATDAQPGLTPFAARASNMIRYRTP 166

Query: 179 PKLGGLYGMAMVGTGENDSTALNRDDGNFAGARLGFASGAFDIAAAITRSHFNSTATIGN 238
                    A +     +S+A +   GNF G  LG++   + IA A  R+   S +    
Sbjct: 167 ASSD---FFADIAYAPGESSAPSHQSGNFYGGSLGWSRKPYYIAYAFQRARSGSAS---- 219

Query: 239 YTHANIGASWDAGFAKFFALYNTVRVNI-VAGTVRKNTAEIGAHIPAFEVGRIRISYAYL 297
              A +       +      Y    + +   G   +N++ +   +P  ++  + ++Y   
Sbjct: 220 ---APVADPAATTYQALSGAYELPDIGLQFYGNYVRNSSNL-PRVPTAKLASLGVTY--- 272

Query: 298 DDRSDDSVRNADGMPRNRDDARQ----FGIGYVHNLSKRTALYGTYARLMN-SGQARYVV 352
            + +  S    + M R  DD  +    + +GY + LSKRT LY  + RL+N +G +  + 
Sbjct: 273 -NVTPVSNLMFEAMQRKVDDTGRSQLAWTLGYDYYLSKRTVLYARWLRLLNRNGASASLA 331

Query: 353 SGGVAPAAGQRSTGWEFGVRHLF 375
           +  VA  +G        G+RH F
Sbjct: 332 TIAVATDSGNGVRVLATGIRHNF 354