Pairwise Alignments

Query, 246 a.a., Two-component transcriptional response regulator, OmpR family from Variovorax sp. SCN45

Subject, 241 a.a., DNA-binding response regulator from Pseudomonas putida KT2440

 Score =  233 bits (594), Expect = 3e-66
 Identities = 126/235 (53%), Positives = 168/235 (71%), Gaps = 6/235 (2%)

Query: 9   ILIVDDDREIRELLTTYLVKNGLRVAAVPTGRHMRAALEESGPFDLIILDLMLPGEDGLT 68
           IL+VDDD+EIRELL TYL ++G +V A   G+  R ALE + P DL+ILD+MLP EDG +
Sbjct: 8   ILMVDDDQEIRELLQTYLSRSGFQVHAEADGKGFRHALETT-PCDLVILDVMLPDEDGFS 66

Query: 69  LCRDLRTGKYKA-TPILMLTARSEEADRILGLEMGADDYLAKPFSARELLARIRSVLRRT 127
           LCR +R    +A  PI+MLTA S+EADR++GLE+GADDYL KPFS REL ARI+++LRRT
Sbjct: 67  LCRWVRQHPRQARVPIIMLTASSDEADRVIGLELGADDYLGKPFSPRELQARIKALLRRT 126

Query: 128 RMLPPNMRSTEAASKLAFGEWQVDTTARHLLDDSGVMVALSGAEYRLLRVFLDHPQKVLS 187
                  ++    + LAF +W++DT +  L    G  V LSGA++ LL++FLDHPQ++L 
Sbjct: 127 EF----GQTAPGNAVLAFDDWRLDTVSHRLFHRDGEEVILSGADFALLKLFLDHPQQILD 182

Query: 188 RDQLLSLTQGREAELFERSIDLLVSRLRQRLRDDAREPRYIKTVRSEGYVLAASV 242
           RD + + T+GRE    +R +D+ VSRLRQRLRD  + PR I+TVR  GY+LAA V
Sbjct: 183 RDTIGNATRGREPMPLDRIVDMAVSRLRQRLRDTDKPPRLIRTVRGSGYLLAAHV 237