Pairwise Alignments

Query, 246 a.a., Two-component transcriptional response regulator, OmpR family from Variovorax sp. SCN45

Subject, 239 a.a., DNA-binding response regulator from Pseudomonas putida KT2440

 Score =  177 bits (450), Expect = 1e-49
 Identities = 107/237 (45%), Positives = 148/237 (62%), Gaps = 10/237 (4%)

Query: 6   SDHILIVDDDREIRELLTTYLVKNGLRVAAVPTGRHMRAALEESGPFDLIILDLMLPGED 65
           S  +L+VDDD EIRELL  YL   G  V A   G+ MR  L      +L++LDLMLPGED
Sbjct: 2   STTLLVVDDDDEIRELLCDYLTDAGYNVLAAADGQQMRDQLARH-KVELVVLDLMLPGED 60

Query: 66  GLTLCRDLRTGKYKATP---ILMLTARSEEADRILGLEMGADDYLAKPFSARELLARIRS 122
           GL+LCR L+     ATP   ++ML+A+    DRI+GLE+GADDYLAKPF  REL+ARI++
Sbjct: 61  GLSLCRQLQ-----ATPGLAVIMLSAKGSTLDRIIGLEVGADDYLAKPFEPRELIARIKA 115

Query: 123 VLRRTRMLPPNMRSTEAASKLAFGEWQVDTTARHLLDDSGVMVALSGAEYRLLRVFLDHP 182
           VLRR + L  +       ++L F  ++++   R L    G  + L  ++YR+LR  L+  
Sbjct: 116 VLRRPQRLGTSAEEPMVDAQL-FAGFRLEHVKRLLTRPDGETLTLPRSDYRVLRELLEAN 174

Query: 183 QKVLSRDQLLSLTQGREAELFERSIDLLVSRLRQRLRDDAREPRYIKTVRSEGYVLA 239
            +V+SRDQL     GR+    +RS+D+ VSRLRQ+LR        I T+R+EGY+L+
Sbjct: 175 NRVVSRDQLTRSAFGRDHLPDDRSVDMCVSRLRQQLRRAPAGTAQILTIRNEGYLLS 231