Pairwise Alignments

Query, 317 a.a., Putative transmembrane sensor from Variovorax sp. SCN45

Subject, 326 a.a., putative Transmembrane sensor from Pseudomonas putida KT2440

 Score =  106 bits (264), Expect = 9e-28
 Identities = 89/291 (30%), Positives = 138/291 (47%), Gaps = 22/291 (7%)

Query: 8   AQAWVVRLGSQQATEDDALAFRRWCAQSRAHADAFVRAREVWQAMAPAALRVRQQAEREA 67
           A  W  R+  Q    + A AF+RW     AH  A+ +A+ +WQ  A  A R+  + +   
Sbjct: 15  ALQWFNRINEQPGQAEGA-AFKRWLLADPAHRAAYDQAQVLWQKSAAPAARLADEEQDAL 73

Query: 68  RR------RMPVAGRRALLGGAVAASVAYLAVSPP----LGLWASVTEWGADYRTATGEQ 117
           +R      R P  G    + G   A+   LAV        G W  + +  ADY ++TG+ 
Sbjct: 74  QRYLDAMARPPARGGWRRVAGLALAACLVLAVGVAGGWHPGYW--LQDLQADY-SSTGQI 130

Query: 118 REVAMADGAVLQMNTQTRVNLQRRGEGGESIELLAGEA--EVVTEASAVARVTVAAAGGT 175
           R+V +AD + + ++  + + +    +G   + LL G A  EV           V AAGG 
Sbjct: 131 RQVILADQSQVTLDAGSAIAVDF-AQGERRVRLLHGAAFFEVTHTGEPFL---VEAAGGE 186

Query: 176 VSAVRARFNIRNLDGEVCVTCLAGQVEV--ARGAQQVRLDEGRQLRYGAAGLGAVAAVDT 233
           V  +  +F +R       VT  +G+V V  A+G     L   +QL Y A  +G   AVD+
Sbjct: 187 VRVLGTQFEVREQGEGAQVTVRSGRVGVSPAQGTVARELTANQQLTYRAGRVGDTLAVDS 246

Query: 234 GPVSAWRRRQLVFNQVPLSEVVAEVNRYRHGRLVLTSEALGRSKVQASFSI 284
               AWR+  L + QVPL++V+ ++ RY  GR++L    LG+ KV  SF +
Sbjct: 247 DNRLAWRQGWLNYYQVPLAQVIDDLGRYYPGRILLLDGDLGQRKVSGSFPV 297