Pairwise Alignments

Query, 320 a.a., DnaJ-class molecular chaperone CbpA from Variovorax sp. SCN45

Subject, 375 a.a., Chaperone protein DnaJ from Pseudomonas putida KT2440

 Score = 94.7 bits (234), Expect = 3e-24
 Identities = 51/138 (36%), Positives = 82/138 (59%), Gaps = 4/138 (2%)

Query: 171 ENRTLSVKIPPGVHPGQFIRLAGQGMPGHGGEPPGDLYLEVRIAPHRLYRVEERDLYMPL 230
           E +TLSVK+P GV  G  IRL+G+G  G  G P GDLY+ + +  H +++ + + LY  +
Sbjct: 211 EYKTLSVKVPAGVDTGDRIRLSGEGEAGTHGGPTGDLYVVISVREHEIFQRDGKHLYCEV 270

Query: 231 PVTPAEAALGAQVQVPTPTGGVVEVTVPRNARGGMKLRLKGRGLA---GKTPGDLYLLIE 287
           P++  +AALG +++VPT   G V++ +P   + G + RL+G+G+A   G   GDL   + 
Sbjct: 271 PISYTDAALGGELEVPT-LDGRVKLKIPEGTQTGKQFRLRGKGVAPVRGGGAGDLLCRVA 329

Query: 288 IALPPADSDDARKAYEQL 305
           +  P   S   R+  E+L
Sbjct: 330 VETPVNLSRRQRELLEEL 347



 Score = 86.7 bits (213), Expect = 8e-22
 Identities = 85/305 (27%), Positives = 127/305 (41%), Gaps = 69/305 (22%)

Query: 1   MEFKDYYSALGIDRTASDDEVRKAYRKLARKYHPDVSK-EPDAEQRMRDINEAKDVLGDK 59
           M  +DYY  LG++R A++ +++KAYR+LA KYHPD +  + ++E + ++ NEA +VL D 
Sbjct: 1   MSKRDYYEVLGVERGATEADLKKAYRRLAMKYHPDRNPGDKESEDKFKEANEAYEVLSDA 60

Query: 60  EKRAAYDALAERVARGGSPDGHFQPPPGWDEGFEFRRGPNQGPADHAD-FSEFFSSLFGE 118
            KRAA+D             GH    P    G     G   G A+ +D F + FS  FG 
Sbjct: 61  SKRAAFDQY-----------GHAGVDPSMGGG-----GAGFGGANFSDIFGDVFSDFFGG 104

Query: 119 AERRGAARQNYKARGEDHHAAIEIALEDALKGAEREI----TLRAQTVDAQGHPQWENRT 174
             R G   +    RG D    +E+ LE+A++G    I     +  Q  D  G  +    +
Sbjct: 105 GGRGGG--RGGAQRGSDLRYTLELNLEEAVRGTTVSIRVPTLVNCQPCDGSGAKKGSTPS 162

Query: 175 L--------SVKIPPGVHPGQFIRLAGQGMPGHGGEPPGDLYLEVRIAPHRLYRVEERDL 226
                     V++  G    Q      Q  P   G+  G +  +   + H   RVEE   
Sbjct: 163 TCPTCGGIGQVRMQQGFFSVQ------QTCPRCHGQ--GKIITDPCTSCHGEGRVEEYK- 213

Query: 227 YMPLPVTPAEAALGAQVQVPTPTGGVVEVTVPRNARGGMKLRLKGRGLAGK---TPGDLY 283
                                     + V VP     G ++RL G G AG      GDLY
Sbjct: 214 -------------------------TLSVKVPAGVDTGDRIRLSGEGEAGTHGGPTGDLY 248

Query: 284 LLIEI 288
           ++I +
Sbjct: 249 VVISV 253