Pairwise Alignments

Query, 320 a.a., DnaJ-class molecular chaperone CbpA from Variovorax sp. SCN45

Subject, 383 a.a., molecular chaperone DnaJ from Magnetospirillum magneticum AMB-1

 Score =  142 bits (359), Expect = 1e-38
 Identities = 107/351 (30%), Positives = 158/351 (45%), Gaps = 74/351 (21%)

Query: 1   MEFKDYYSALGIDRTASDDEVRKAYRKLARKYHPDVSK-EPDAEQRMRDINEAKDVLGDK 59
           M  +DYY  LG+++ AS D+++KAYRK A ++HPD +    DAEQ+ ++INEA DVL D+
Sbjct: 1   MSKQDYYELLGVEKGASPDDIKKAYRKQAMQFHPDRNPGNADAEQKFKEINEAYDVLKDE 60

Query: 60  EKRAAYDALAERVARGGSPDGHFQPPPGWDEGFEFRRGPNQGPADHADFSEFFSSLF--- 116
           +KRAAYD         G P G      G   GF        G      FS+ F  +F   
Sbjct: 61  QKRAAYDRFGHAAFEQGGPGG------GGGGGF--------GGFGGGGFSDIFDEMFGEF 106

Query: 117 -------GEAERRGA-ARQNYKARGEDHHAAIEIALE-------DALKGAEREITLRAQT 161
                  G++  RGA  R N     ED  A     ++       +  KG   +   +  T
Sbjct: 107 MGGGGRRGQSTGRGADLRYNMDISLEDAFAGKTATVKVPSSAPCEDCKGTGGKDGAQPVT 166

Query: 162 VDA-QGHPQW-------------------------------------ENRTLSVKIPPGV 183
             A  GH +                                      + +TL V IP GV
Sbjct: 167 CSACHGHGKVRQQQGFFTIERTCPTCQGMGKIIKDPCRSCGGSGRTRKEKTLQVNIPAGV 226

Query: 184 HPGQFIRLAGQGMPGHGGEPPGDLYLEVRIAPHRLYRVEERDLYMPLPVTPAEAALGAQV 243
             G  IRLAG+G  G  G P GDLY+ + IA HR+++ +  +++  +P+    AALG  +
Sbjct: 227 EDGTRIRLAGEGEAGMRGAPAGDLYIFLSIAAHRIFQRDGANIFCRVPIPMTTAALGGTI 286

Query: 244 QVPTPTGGVVEVTVPRNARGGMKLRLKGRG---LAGKTPGDLYLLIEIALP 291
           +VPT  G   +VT+P   + G + RL+ +G   L     GD+++   +  P
Sbjct: 287 EVPTIDGSKAKVTIPEGTQTGNQFRLRSKGMSVLRSPARGDMFIQAVVETP 337