Pairwise Alignments

Query, 217 a.a., ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines) from Variovorax sp. SCN45

Subject, 218 a.a., Amino acid ABC transporter, permease protein from Pseudomonas putida KT2440

 Score =  111 bits (278), Expect = 9e-30
 Identities = 59/158 (37%), Positives = 97/158 (61%), Gaps = 2/158 (1%)

Query: 55  LYVQLFQGTPLLMQLFLAYFGIAL--FGIDVSAWTAASVALTLYTSAFLAEIWRGCVASI 112
           +Y+++F+GT LL+QLF  +F + L  F +++S +T A V L L+  A+ AEI RG + S+
Sbjct: 50  VYIEIFRGTSLLVQLFWLFFVLPLPPFNLELSPYTVAIVGLGLHIGAYGAEIMRGAINSV 109

Query: 113 PKGQWEASGSLALSFGEQMRHVILPQAVKIAIAPTVGFLVQVIKGTALASVIGFVELTKA 172
            KGQ+EA  +L      + R +ILPQA+  A+ P    L++++K T+L S+I   +L+  
Sbjct: 110 AKGQYEACTALNFRPFTRFRRIILPQALLAAMGPGTNLLIELLKNTSLVSLITLADLSFR 169

Query: 173 GSMISNATFKPFVVFSCVALLYFVLCFPVSLYAKTLER 210
              +  ATF+   VF+   L+YFV+   ++L  + LER
Sbjct: 170 ARQLDQATFETLKVFALALLMYFVMAQAINLAMRRLER 207