Pairwise Alignments

Query, 217 a.a., ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines) from Variovorax sp. SCN45

Subject, 224 a.a., amino acid ABC transporter permease from Dickeya dianthicola ME23

 Score =  134 bits (338), Expect = 1e-36
 Identities = 78/207 (37%), Positives = 124/207 (59%), Gaps = 1/207 (0%)

Query: 6   LWDILRNLLMALRWTVVLSLIAFVGGGIVGALLLFLRLRGGRFANRAVGLYVQLFQGTPL 65
           +W  L  LL  L  T+ L L+A +GG ++G  L   R    R     V  +V+LF+ TP+
Sbjct: 10  IWQQLPVLLRGLGVTLELWLLAGIGGTLLGLALGIARTARRRAVRLPVIAFVELFRNTPV 69

Query: 66  LMQLFLAYFGI-ALFGIDVSAWTAASVALTLYTSAFLAEIWRGCVASIPKGQWEASGSLA 124
           L+QL   Y+ +  L G+ +S + AA +ALTLYT+A+  EI+R  + S+ +GQWE + +L 
Sbjct: 70  LIQLIWFYYAMPVLTGLQLSTFGAAVLALTLYTAAYSTEIFRAGLQSMEQGQWEGAKALG 129

Query: 125 LSFGEQMRHVILPQAVKIAIAPTVGFLVQVIKGTALASVIGFVELTKAGSMISNATFKPF 184
           +S+   +R VILPQ ++  +      L+++ K T+LAS++   EL   G ++S+ T++P 
Sbjct: 130 MSYPLALRRVILPQVLQRMLPALTNRLIELAKVTSLASMLAVNELMYQGRLLSSDTYRPL 189

Query: 185 VVFSCVALLYFVLCFPVSLYAKTLERK 211
            + + VAL YFVL +P S  A  LER+
Sbjct: 190 EILTVVALFYFVLIWPGSYLAARLERR 216